Information for 6-RTGMCCATGAGAA (Motif 5)

C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A T C G G T C A C G T A
Reverse Opposite:
A C G T A C G T A T G C A G C T A T G C C G T A A C G T A C T G C T A G A C G T A G T C G T C A A G C T
p-value:1e-11
log p-value:-2.662e+01
Information Content per bp:1.906
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.5 +/- 16.9bp
Average Position of motif in Background58.3 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESRRB/MA0141.3/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-RTGMCCATGAGAA
NATGACCTTGA---
 A C G T C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A T C G G T C A C G T A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:RTGMCCATGAGAA
-TGACCTTGAV--
 C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A T C G G T C A C G T A
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:RTGMCCATGAGAA
ATGACCTTGAA--
 C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A T C G G T C A C G T A
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:RTGMCCATGAGAA
ATGACCTTGA---
 C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A T C G G T C A C G T A
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:RTGMCCATGAGAA
-TGACCTTGAN--
 C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A T C G G T C A C G T A
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:RTGMCCATGAGAA
NTGACCTTGA---
 C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A T C G G T C A C G T A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----RTGMCCATGAGAA
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A T C G G T C A C G T A
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----RTGMCCATGAGAA
GGGTGTGCCCAAAAGG-
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A T C G G T C A C G T A
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:RTGMCCATGAGAA--
-----CSTGGGAAAD
 C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A T C G G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-RTGMCCATGAGAA
BNTGDCCTTG----
 A C G T C T G A A C G T A C T G G T C A A G T C A G T C C G T A A C G T A T C G C T G A A T C G G T C A C G T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T