Information for 4-GAGCCTCSAGGAGASA (Motif 4)

C A T G C T G A C T A G G T A C A T G C A C G T A T G C A T C G C G T A A T C G A C T G C G T A A C T G C G T A T A C G C G T A
Reverse Opposite:
A C G T A T C G C G A T A G T C A C G T A G T C A T G C G A C T T A C G A T C G C G T A A T C G A C T G A G T C A G C T G A T C
p-value:1e-12
log p-value:-2.857e+01
Information Content per bp:1.746
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif15.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets62.6 +/- 28.3bp
Average Position of motif in Background50.5 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GAGCCTCSAGGAGASA-----
-NNCCTGNAAAAAAAAAAAAA
 C A T G C T G A C T A G G T A C A T G C A C G T A T G C A T C G C G T A A T C G A C T G C G T A A C T G C G T A T A C G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GAGCCTCSAGGAGASA-----
-NNCCTGNAAAAAAAAAAAAA
 C A T G C T G A C T A G G T A C A T G C A C G T A T G C A T C G C G T A A T C G A C T G C G T A A C T G C G T A T A C G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GAGCCTCSAGGAGASA----
---NTNNNAGGAGTCTCNTN
 C A T G C T G A C T A G G T A C A T G C A C G T A T G C A T C G C G T A A T C G A C T G C G T A A C T G C G T A T A C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:4
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GAGCCTCSAGGAGASA
-TGCCCNGGGGCA---
 C A T G C T G A C T A G G T A C A T G C A C G T A T G C A T C G C G T A A T C G A C T G C G T A A C T G C G T A T A C G C G T A
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.48
Offset:8
Orientation:forward strand
Alignment:GAGCCTCSAGGAGASA--
--------AGGTGTGAAM
 C A T G C T G A C T A G G T A C A T G C A C G T A T G C A T C G C G T A A T C G A C T G C G T A A C T G C G T A T A C G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:GAGCCTCSAGGAGASA------
--GCCASCAGGGGGCGCYVNNG
 C A T G C T G A C T A G G T A C A T G C A C G T A T G C A T C G C G T A A T C G A C T G C G T A A C T G C G T A T A C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.48
Offset:8
Orientation:forward strand
Alignment:GAGCCTCSAGGAGASA
--------AGGTGTGA
 C A T G C T G A C T A G G T A C A T G C A C G T A T G C A T C G C G T A A T C G A C T G C G T A A C T G C G T A T A C G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.48
Offset:8
Orientation:forward strand
Alignment:GAGCCTCSAGGAGASA
--------AGGTGTGA
 C A T G C T G A C T A G G T A C A T G C A C G T A T G C A T C G C G T A A T C G A C T G C G T A A C T G C G T A T A C G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.47
Offset:8
Orientation:forward strand
Alignment:GAGCCTCSAGGAGASA
--------AGGTGTCA
 C A T G C T G A C T A G G T A C A T G C A C G T A T G C A T C G C G T A A T C G A C T G C G T A A C T G C G T A T A C G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.47
Offset:0
Orientation:forward strand
Alignment:GAGCCTCSAGGAGASA---
TGGCCACCAGGGGGCGCTA
 C A T G C T G A C T A G G T A C A T G C A C G T A T G C A T C G C G T A A T C G A C T G C G T A A C T G C G T A T A C G C G T A A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A