Information for 3-ACCTGCAGGCTCC (Motif 3)

T C G A T A G C A G T C C G A T A T C G A G T C C G T A T A C G A T C G A G T C A G C T A G T C A T G C
Reverse Opposite:
A T C G T A C G T C G A T C A G T A G C A G T C C G A T A C T G T A G C C G T A T A C G A T C G A G C T
p-value:1e-15
log p-value:-3.487e+01
Information Content per bp:1.753
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.66%
Number of Background Sequences with motif265.1
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets44.8 +/- 24.3bp
Average Position of motif in Background46.8 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ACCTGCAGGCTCC
SNGCACCTGCHS-----
 A C G T A C G T A C G T A C G T T C G A T A G C A G T C C G A T A T C G A G T C C G T A T A C G A T C G A G T C A G C T A G T C A T G C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACCTGCAGGCTCC
NCACCTGTN------
 A C G T A C G T T C G A T A G C A G T C C G A T A T C G A G T C C G T A T A C G A T C G A G T C A G C T A G T C A T G C
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACCTGCAGGCTCC
NNCACCTGNN------
 A C G T A C G T A C G T T C G A T A G C A G T C C G A T A T C G A G T C C G T A T A C G A T C G A G T C A G C T A G T C A T G C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACCTGCAGGCTCC-
DCHCAGCAGGRGGCC
 A C G T T C G A T A G C A G T C C G A T A T C G A G T C C G T A T A C G A T C G A G T C A G C T A G T C A T G C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----ACCTGCAGGCTCC
RYHYACCTGB-------
 A C G T A C G T A C G T A C G T T C G A T A G C A G T C C G A T A T C G A G T C C G T A T A C G A T C G A G T C A G C T A G T C A T G C
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.56
Offset:8
Orientation:forward strand
Alignment:ACCTGCAGGCTCC-
--------GCTCCG
 T C G A T A G C A G T C C G A T A T C G A G T C C G T A T A C G A T C G A G T C A G C T A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ACCTGCAGGCTCC
AACACCTGCT------
 A C G T A C G T A C G T T C G A T A G C A G T C C G A T A T C G A G T C C G T A T A C G A T C G A G T C A G C T A G T C A T G C
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ACCTGCAGGCTCC
DCTCAGCAGG----
 A C G T T C G A T A G C A G T C C G A T A T C G A G T C C G T A T A C G A T C G A G T C A G C T A G T C A T G C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACCTGCAGGCTCC
CGCACCTGCT------
 A C G T A C G T A C G T T C G A T A G C A G T C C G A T A T C G A G T C C G T A T A C G A T C G A G T C A G C T A G T C A T G C
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ACCTGCAGGCTCC
TGCCCCCGGGCA--
 A C G T T C G A T A G C A G T C C G A T A T C G A G T C C G T A T A C G A T C G A G T C A G C T A G T C A T G C
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T