Information for 4-TGYTGTCTHA (Motif 10)

C G A T A C T G A G C T G C A T A T C G A C G T G T A C A G C T G C A T C T G A
Reverse Opposite:
A G C T C G T A C T G A A C T G C G T A A T G C C G T A C T G A T G A C C G T A
p-value:1e-10
log p-value:-2.418e+01
Information Content per bp:1.690
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.14%
Number of Background Sequences with motif508.0
Percentage of Background Sequences with motif1.07%
Average Position of motif in Targets49.1 +/- 27.3bp
Average Position of motif in Background50.4 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGYTGTCTHA-----
NNTNNTGTCTGGNNTNG
 A C G T A C G T C G A T A C T G A G C T G C A T A T C G A C G T G T A C A G C T G C A T C T G A A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGYTGTCTHA
--CTGTCTGG
 C G A T A C T G A G C T G C A T A T C G A C G T G T A C A G C T G C A T C T G A
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGYTGTCTHA
--TWGTCTGV
 C G A T A C T G A G C T G C A T A T C G A C G T G T A C A G C T G C A T C T G A
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGYTGTCTHA
-CCTGTCAA-
 C G A T A C T G A G C T G C A T A T C G A C G T G T A C A G C T G C A T C T G A
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGYTGTCTHA
TGCTGACTCA
 C G A T A C T G A G C T G C A T A T C G A C G T G T A C A G C T G C A T C T G A
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGYTGTCTHA
--NTGTCAN-
 C G A T A C T G A G C T G C A T A T C G A C G T G T A C A G C T G C A T C T G A
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGYTGTCTHA
-GCTGTCAA-
 C G A T A C T G A G C T G C A T A T C G A C G T G T A C A G C T G C A T C T G A
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGYTGTCTHA----
NNTTTTGTTTTGATNT
 A C G T A C G T C G A T A C T G A G C T G C A T A T C G A C G T G T A C A G C T G C A T C T G A A C G T A C G T A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PB0120.1_Foxj1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGYTGTCTHA-
GTNTTGTTGTGANNT
 A C G T A C G T A C G T A C G T C G A T A C T G A G C T G C A T A T C G A C G T G T A C A G C T G C A T C T G A A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGYTGTCTHA
VBSYGTCTGG
 C G A T A C T G A G C T G C A T A T C G A C G T G T A C A G C T G C A T C T G A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G