Information for 5-ACAGTGCCAT (Motif 4)

T C G A A T G C C G T A C T A G C A G T C T A G A T G C A G T C G T C A A G C T
Reverse Opposite:
T C G A A C G T C T A G A T C G G A T C G T C A A G T C A C G T A T C G A G C T
p-value:1e-12
log p-value:-2.946e+01
Information Content per bp:1.831
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.15%
Number of Background Sequences with motif230.4
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets51.1 +/- 21.4bp
Average Position of motif in Background49.8 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ACAGTGCCAT--
---ATGCCAACC
 T C G A A T G C C G T A C T A G C A G T C T A G A T G C A G T C G T C A A G C T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

SOX21/MA0866.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACAGTGCCAT----
AACACTACCATTGTT
 A C G T T C G A A T G C C G T A C T A G C A G T C T A G A T G C A G T C G T C A A G C T A C G T A C G T A C G T A C G T
T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T

Sox1/MA0870.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACAGTGCCAT----
AACAATAACATTGTT
 A C G T T C G A A T G C C G T A C T A G C A G T C T A G A T G C A G T C G T C A A G C T A C G T A C G T A C G T A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ACAGTGCCAT-
--CGTGCCAAG
 T C G A A T G C C G T A C T A G C A G T C T A G A T G C A G T C G T C A A G C T A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------ACAGTGCCAT-
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A A T G C C G T A C T A G C A G T C T A G A T G C A G T C G T C A A G C T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACAGTGCCAT--
--GGTGCCAAGT
 T C G A A T G C C G T A C T A G C A G T C T A G A T G C A G T C G T C A A G C T A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:ACAGTGCCAT
----TGCCAA
 T C G A A T G C C G T A C T A G C A G T C T A G A T G C A G T C G T C A A G C T
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ACAGTGCCAT--
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T T C G A A T G C C G T A C T A G C A G T C T A G A T G C A G T C G T C A A G C T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACAGTGCCAT
CACAGN-----
 A C G T T C G A A T G C C G T A C T A G C A G T C T A G A T G C A G T C G T C A A G C T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ACAGTGCCAT--
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C G T T C G A A T G C C G T A C T A G C A G T C T A G A T G C A G T C G T C A A G C T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G