Information for 3-SAGCGCCCYM (Motif 2)

A T G C T C G A T A C G A T G C C A T G A T G C G T A C G T A C A G T C G T A C
Reverse Opposite:
C A T G T C A G C A T G C A T G T A C G G T A C T A C G A T G C A G C T T A C G
p-value:1e-51
log p-value:-1.178e+02
Information Content per bp:1.517
Number of Target Sequences with motif107.0
Percentage of Target Sequences with motif12.89%
Number of Background Sequences with motif945.3
Percentage of Background Sequences with motif1.99%
Average Position of motif in Targets55.5 +/- 20.8bp
Average Position of motif in Background49.6 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----SAGCGCCCYM--
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T A C G T A T G C T C G A T A C G A T G C C A T G A T G C G T A C G T A C A G T C G T A C A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:SAGCGCCCYM
CAGCC-----
 A T G C T C G A T A C G A T G C C A T G A T G C G T A C G T A C A G T C G T A C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:SAGCGCCCYM
--GCTCCG--
 A T G C T C G A T A C G A T G C C A T G A T G C G T A C G T A C A G T C G T A C
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----SAGCGCCCYM---
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T A T G C T C G A T A C G A T G C C A T G A T G C G T A C G T A C A G T C G T A C A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-SAGCGCCCYM
AGCGCGCC---
 A C G T A T G C T C G A T A C G A T G C C A T G A T G C G T A C G T A C A G T C G T A C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---SAGCGCCCYM--
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T A T G C T C G A T A C G A T G C C A T G A T G C G T A C G T A C A G T C G T A C A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----SAGCGCCCYM---
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A T G C T C G A T A C G A T G C C A T G A T G C G T A C G T A C A G T C G T A C A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0008.1_E2F2_1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---SAGCGCCCYM--
NTCGCGCGCCTTNNN
 A C G T A C G T A C G T A T G C T C G A T A C G A T G C C A T G A T G C G T A C G T A C A G T C G T A C A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--SAGCGCCCYM
CACAGN------
 A C G T A C G T A T G C T C G A T A C G A T G C C A T G A T G C G T A C G T A C A G T C G T A C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---SAGCGCCCYM
RGTTAGTGCCCY-
 A C G T A C G T A C G T A T G C T C G A T A C G A T G C C A T G A T G C G T A C G T A C A G T C G T A C
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T