Information for 7-TGCCAAATAA (Motif 10)

A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C T G A G T C C G T A
p-value:1e-5
log p-value:-1.169e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.8 +/- 21.6bp
Average Position of motif in Background50.4 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--TGCCAAATAA
GGTGCCAAGT--
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TGCCAAATAA
CGTGCCAAG---
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGCCAAATAA
TGCCAA----
 A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGCCAAATAA
TTGCCAAG---
 A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGCCAAATAA
ATGCCAACC--
 A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGCCAAATAA------
TGCCAAAATAAACANN
 A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

RAX/MA0718.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGCCAAATAA-
-GCCAATTAAC
 A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A A C G T
A C G T T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C

MSX2/MA0708.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGCCAAATAA
--CCAATTAA
 A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A
A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGCCAAATAA
TGTCANYT--
 A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGCCAAATAA-
CAATTGCAAAAATAT
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T C G T A C G T A A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T