Information for 6-GCCYCCTHGC (Motif 5)

A C T G A G T C A T G C G A T C A G T C A G T C A C G T G C A T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A A C T G C T A G C T A G A T C G A C T G A G T C
p-value:1e-11
log p-value:-2.695e+01
Information Content per bp:1.819
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif43.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets36.9 +/- 20.2bp
Average Position of motif in Background53.4 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCCYCCTHGC-
CGCCCCCTGACA
 A C G T A C T G A G T C A T G C G A T C A G T C A G T C A C G T G C A T A C T G A G T C A C G T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------GCCYCCTHGC-
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A T G C G A T C A G T C A G T C A C G T G C A T A C T G A G T C A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------GCCYCCTHGC---
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A T G C G A T C A G T C A G T C A C G T G C A T A C T G A G T C A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCCYCCTHGC-----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C T G A G T C A T G C G A T C A G T C A G T C A C G T G C A T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCCYCCTHGC-----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A T G C G A T C A G T C A G T C A C G T G C A T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCYCCTHGC----
TGTTKCCTAGCAACM
 A C G T A C T G A G T C A T G C G A T C A G T C A G T C A C G T G C A T A C T G A G T C A C G T A C G T A C G T A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCCYCCTHGC
GCCGCCATCTTG-
 A C G T A C G T A C G T A C T G A G T C A T G C G A T C A G T C A G T C A C G T G C A T A C T G A G T C
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCCYCCTHGC
GCNGCCATCTTG-
 A C G T A C G T A C G T A C T G A G T C A T G C G A T C A G T C A G T C A C G T G C A T A C T G A G T C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCCYCCTHGC---
--NNACTTGCCTT
 A C T G A G T C A T G C G A T C A G T C A G T C A C G T G C A T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCYCCTHGC
GGCGCGCT---
 A C G T A C T G A G T C A T G C G A T C A G T C A G T C A C G T G C A T A C T G A G T C
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T