Information for 6-TTGCTGCCCACCTGTG (Motif 3)

G A C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A T A G C A G T C C G A T A C T G A C G T A C T G
Reverse Opposite:
A G T C G T C A A G T C C G T A C T A G A C T G A C G T A C T G A C T G A C T G A G T C C G T A A C T G G T A C C G T A C G T A
p-value:1e-15
log p-value:-3.684e+01
Information Content per bp:1.834
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.1 +/- 17.5bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTGCTGCCCACCTGTG
---ATGCCCACC----
 G A C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A T A G C A G T C C G A T A C T G A C G T A C T G
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTGCTGCCCACCTGTG----
ANAGTGCCACCTGGTGGCCA
 G A C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A T A G C A G T C C G A T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTGCTGCCCACCTGTG
---CTGCCCGCA----
 G A C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A T A G C A G T C C G A T A C T G A C G T A C T G
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTGCTGCCCACCTGTG-
---NTGCCCANNGGTNA
 G A C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A T A G C A G T C C G A T A C T G A C G T A C T G A C G T
A C G T A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTGCTGCCCACCTGTG----
-TAGCGCCCCCTGGTGGCCA
 G A C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A T A G C A G T C C G A T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTGCTGCCCACCTGTG
---ATGCCAACC----
 G A C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A T A G C A G T C C G A T A C T G A C G T A C T G
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTGCTGCCCACCTGTG
ACTATGCCAACCTACC
 G A C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A T A G C A G T C C G A T A C T G A C G T A C T G
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TTGCTGCCCACCTGTG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T G A C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A T A G C A G T C C G A T A C T G A C G T A C T G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

ZEB1/MA0103.2/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TTGCTGCCCACCTGTG
-----CCTCACCTG--
 G A C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A T A G C A G T C C G A T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TTGCTGCCCACCTGTG
GGGTGTGCCCAAAAGG-
 A C G T G A C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T A C G T C A T A G C A G T C C G A T A C T G A C G T A C T G
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T