Information for 5-RGAGGGYGCTGTYTCC (Motif 2)

C T A G C T A G C G T A A C T G A T C G A T C G A G C T A C T G A G T C A C G T A T C G A C G T A G T C A G C T A T G C A G T C
Reverse Opposite:
A C T G A T C G C T G A T C A G C G T A A T G C C G T A A C T G A G T C C T G A A T G C A T G C A G T C A C G T A G T C A G T C
p-value:1e-18
log p-value:-4.296e+01
Information Content per bp:1.808
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.1 +/- 21.5bp
Average Position of motif in Background11.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:RGAGGGYGCTGTYTCC
------NGCTN-----
 C T A G C T A G C G T A A C T G A T C G A T C G A G C T A C T G A G T C A C G T A T C G A C G T A G T C A G C T A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.53
Offset:2
Orientation:forward strand
Alignment:RGAGGGYGCTGTYTCC
--AGGVNCCTTTGT--
 C T A G C T A G C G T A A C T G A T C G A T C G A G C T A C T G A G T C A C G T A T C G A C G T A G T C A G C T A T G C A G T C
A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:3
Score:0.53
Offset:8
Orientation:forward strand
Alignment:RGAGGGYGCTGTYTCC
--------CTGTTTAC
 C T A G C T A G C G T A A C T G A T C G A T C G A G C T A C T G A G T C A C G T A T C G A C G T A G T C A G C T A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.52
Offset:7
Orientation:forward strand
Alignment:RGAGGGYGCTGTYTCC
-------GCTGTG---
 C T A G C T A G C G T A A C T G A T C G A T C G A G C T A C T G A G T C A C G T A T C G A C G T A G T C A G C T A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:5
Score:0.52
Offset:6
Orientation:forward strand
Alignment:RGAGGGYGCTGTYTCC-
------TCCTGTTTACA
 C T A G C T A G C G T A A C T G A T C G A T C G A G C T A C T G A G T C A C G T A T C G A C G T A G T C A G C T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:RGAGGGYGCTGTYTCC-
-----CAGCTGTTTCCT
 C T A G C T A G C G T A A C T G A T C G A T C G A G C T A C T G A G T C A C G T A T C G A C G T A G T C A G C T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--RGAGGGYGCTGTYTCC
NNNAAGGGGGCGGGNNN-
 A C G T A C G T C T A G C T A G C G T A A C T G A T C G A T C G A G C T A C T G A G T C A C G T A T C G A C G T A G T C A G C T A T G C A G T C
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:RGAGGGYGCTGTYTCC
AGATGCTRCTRCCHT-
 C T A G C T A G C G T A A C T G A T C G A T C G A G C T A C T G A G T C A C G T A T C G A C G T A G T C A G C T A T G C A G T C
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:RGAGGGYGCTGTYTCC
----GGGGGTGTGTCC
 C T A G C T A G C G T A A C T G A T C G A T C G A G C T A C T G A G T C A C G T A T C G A C G T A G T C A G C T A T G C A G T C
A C G T A C G T A C G T A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C

Spz1/MA0111.1/Jaspar

Match Rank:10
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:RGAGGGYGCTGTYTCC--
-------GCTGTTACCCT
 C T A G C T A G C G T A A C T G A T C G A T C G A G C T A C T G A G T C A C G T A T C G A C G T A G T C A G C T A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T