Information for 10-TCTGTGACCA (Motif 9)

A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C G T A G T C C G T A A G T C C G T A A C T G C G T A
p-value:1e-5
log p-value:-1.225e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif13.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets46.8 +/- 24.0bp
Average Position of motif in Background49.3 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TCTGTGACCA
----TGACCT
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCTGTGACCA--
SCTGTCARCACC
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G T C C G T A A C G T A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TCTGTGACCA-
---GTGACCTT
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCTGTGACCA
GCTGTG----
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G T C C G T A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TCTGTGACCA--
----TGACCYCT
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCTGTGACCA
TGTCTGDCACCT
 A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G T C C G T A
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCTGTGACCA------
NNNNTGACCCGGCGCG
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

GLI2/MA0734.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TCTGTGACCA-----
---GCGACCACACTG
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCTGTGACCA
CTGTCTGTCACCT
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G T C C G T A
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TCTGTGACCA--
----TGACCTYA
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A