Information for 10-AGTCARNGTCWCA (Motif 8)

C T G A C T A G A C G T A G T C C G T A T C A G C G T A C T A G G A C T A T G C G C T A G T A C G C T A
Reverse Opposite:
C A G T A C T G C G A T A T C G C T G A A G T C A C G T A G T C A C G T C T A G C G T A A G T C A G C T
p-value:1e-7
log p-value:-1.671e+01
Information Content per bp:1.754
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif18.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets59.6 +/- 24.6bp
Average Position of motif in Background54.6 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGTCARNGTCWCA
AGGTCAAGGTCA--
 A C G T C T G A C T A G A C G T A G T C C G T A T C A G C G T A C T A G G A C T A T G C G C T A G T A C G C T A
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGTCARNGTCWCA
AAAAGTCAA-------
 A C G T A C G T A C G T C T G A C T A G A C G T A G T C C G T A T C A G C G T A C T A G G A C T A T G C G C T A G T A C G C T A
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGTCARNGTCWCA
AGGTCAAGGTCA--
 A C G T C T G A C T A G A C G T A G T C C G T A T C A G C G T A C T A G G A C T A T G C G C T A G T A C G C T A
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGTCARNGTCWCA
GTAGGTCACTGGGTCA
 A C G T A C G T A C G T C T G A C T A G A C G T A G T C C G T A T C A G C G T A C T A G G A C T A T G C G C T A G T A C G C T A
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGTCARNGTCWCA
-NTCAAGGTCA--
 C T G A C T A G A C G T A G T C C G T A T C A G C G T A C T A G G A C T A T G C G C T A G T A C G C T A
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGTCARNGTCWCA
-BTCAAGGTCA--
 C T G A C T A G A C G T A G T C C G T A T C A G C G T A C T A G G A C T A T G C G C T A G T A C G C T A
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGTCARNGTCWCA
--TCAAGGTCATA
 C T G A C T A G A C G T A G T C C G T A T C A G C G T A C T A G G A C T A T G C G C T A G T A C G C T A
A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGTCARNGTCWCA
RGTTAGTGCCCY-
 C T G A C T A G A C G T A G T C C G T A T C A G C G T A C T A G G A C T A T G C G C T A G T A C G C T A
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGTCARNGTCWCA---
TATTCAAGGTCATGCGA
 A C G T C T G A C T A G A C G T A G T C C G T A T C A G C G T A C T A G G A C T A T G C G C T A G T A C G C T A A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGTCARNGTCWCA
--TCAAGGTCAN-
 C T G A C T A G A C G T A G T C C G T A T C A G C G T A C T A G G A C T A T G C G C T A G T A C G C T A
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T