p-value: | 1e-9 |
log p-value: | -2.148e+01 |
Information Content per bp: | 1.869 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.83% |
Number of Background Sequences with motif | 9.2 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 62.7 +/- 20.3bp |
Average Position of motif in Background | 50.3 +/- 27.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 1 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGGTGCCATGCTC AGGTGTCA----- |
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PH0164.1_Six4/Jaspar
Match Rank: | 2 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----AGGTGCCATGCTC TNNNNGGTGTCATNTNT |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGGTGCCATGCTC AGGTGNCAGACAG |
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ID4/MA0824.1/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGGTGCCATGCTC GACAGGTGTN------ |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGGTGCCATGCTC AGGTGHCAGACA- |
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E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer
Match Rank: | 6 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGGTGCCATGCTC NNCAGGTGNN------ |
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TBX4/MA0806.1/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGGTGCCATGCTC AGGTGTGA----- |
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PB0029.1_Hic1_1/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----AGGTGCCATGCTC NGTAGGTTGGCATNNN- |
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TBX5/MA0807.1/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGGTGCCATGCTC AGGTGTGA----- |
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Hic1/MA0739.1/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGGTGCCATGCTC --ATGCCAACC-- |
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