Information for 5-GTRTCTTTHTTMAGAA (Motif 3)

A T C G A C G T C T A G G A C T G T A C A G C T C G A T A C G T G C A T A C G T A C G T G T A C C G T A C T A G C G T A C G T A
Reverse Opposite:
C G A T A C G T A G T C A C G T A C T G T G C A G T C A C G T A C G T A C G T A C T G A A C T G C G T A G A T C C G T A A T G C
p-value:1e-13
log p-value:-3.167e+01
Information Content per bp:1.752
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.6 +/- 27.7bp
Average Position of motif in Background46.5 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:1
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:GTRTCTTTHTTMAGAA--
------TTCTNNAGAANT
 A T C G A C G T C T A G G A C T G T A C A G C T C G A T A C G T G C A T A C G T A C G T G T A C C G T A C T A G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T

Stat6/MA0520.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GTRTCTTTHTTMAGAA--
---CATTTCCTGAGAAAT
 A T C G A C G T C T A G G A C T G T A C A G C T C G A T A C G T G C A T A C G T A C G T G T A C C G T A C T A G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:3
Score:0.61
Offset:6
Orientation:forward strand
Alignment:GTRTCTTTHTTMAGAA
------TTCCKNAGAA
 A T C G A C G T C T A G G A C T G T A C A G C T C G A T A C G T G C A T A C G T A C G T G T A C C G T A C T A G C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTRTCTTTHTTMAGAA-
---TCTTTANTAATANN
 A T C G A C G T C T A G G A C T G T A C A G C T C G A T A C G T G C A T A C G T A C G T G T A C C G T A C T A G C G T A C G T A A C G T
A C G T A C G T A C G T A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GTRTCTTTHTTMAGAA-
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A T C G A C G T C T A G G A C T G T A C A G C T C G A T A C G T G C A T A C G T A C G T G T A C C G T A C T A G C G T A C G T A A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

PB0116.1_Elf3_2/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GTRTCTTTHTTMAGAA-
GNATTTTTTTTTTGANC
 A T C G A C G T C T A G G A C T G T A C A G C T C G A T A C G T G C A T A C G T A C G T G T A C C G T A C T A G C G T A C G T A A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

MEF2A/MA0052.3/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GTRTCTTTHTTMAGAA
---TCTATTTTTAGA-
 A T C G A C G T C T A G G A C T G T A C A G C T C G A T A C G T G C A T A C G T A C G T G T A C C G T A C T A G C G T A C G T A
A C G T A C G T A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GTRTCTTTHTTMAGAA-
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A T C G A C G T C T A G G A C T G T A C A G C T C G A T A C G T G C A T A C G T A C G T G T A C C G T A C T A G C G T A C G T A A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:9
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GTRTCTTTHTTMAGAA--
------TTTCTNAGAAAN
 A T C G A C G T C T A G G A C T G T A C A G C T C G A T A C G T G C A T A C G T A C G T G T A C C G T A C T A G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GTRTCTTTHTTMAGAA
----CTATTTTTGG--
 A T C G A C G T C T A G G A C T G T A C A G C T C G A T A C G T G C A T A C G T A C G T G T A C C G T A C T A G C G T A C G T A
A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T A C G T