Information for 4-AGCCGGTGGTGCG (Motif 2)

T G C A T A C G A T G C G T A C C A T G A C T G C G A T A C T G A T C G G A C T A C T G G A T C A C T G
Reverse Opposite:
T A G C C T A G T A G C C T G A A T G C T A G C G C T A A G T C G T A C C A T G A T C G A G T C A C G T
p-value:1e-14
log p-value:-3.413e+01
Information Content per bp:1.667
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif89.7
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets54.8 +/- 28.6bp
Average Position of motif in Background50.6 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AGCCGGTGGTGCG
SDGCAGGTGCNS--
 A C G T T G C A T A C G A T G C G T A C C A T G A C T G C G A T A C T G A T C G G A C T A C T G G A T C A C T G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AGCCGGTGGTGCG
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T T G C A T A C G A T G C G T A C C A T G A C T G C G A T A C T G A T C G G A C T A C T G G A T C A C T G
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

TCF3/MA0522.2/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGCCGGTGGTGCG
NNCAGGTGTN---
 T G C A T A C G A T G C G T A C C A T G A C T G C G A T A C T G A T C G G A C T A C T G G A T C A C T G
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGCCGGTGGTGCG
AACAGGTGNT---
 T G C A T A C G A T G C G T A C C A T G A C T G C G A T A C T G A T C G G A C T A C T G G A T C A C T G
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGCCGGTGGTGCG
AACAGGTGT----
 T G C A T A C G A T G C G T A C C A T G A C T G C G A T A C T G A T C G G A C T A C T G G A T C A C T G
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGCCGGTGGTGCG
NNCAGGTGNN---
 T G C A T A C G A T G C G T A C C A T G A C T G C G A T A C T G A T C G G A C T A C T G G A T C A C T G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T

MAX::MYC/MA0059.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGCCGGTGGTGCG
GACCACGTGGT---
 A C G T T G C A T A C G A T G C G T A C C A T G A C T G C G A T A C T G A T C G G A C T A C T G G A T C A C T G
C T A G C T G A T A C G G T A C C G T A A G T C C T A G A G C T A C T G A C T G G A C T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGCCGGTGGTGCG
NNCAGGTGCG---
 T G C A T A C G A T G C G T A C C A T G A C T G C G A T A C T G A T C G G A C T A C T G G A T C A C T G
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGCCGGTGGTGCG
AGCAGCTGCT---
 T G C A T A C G A T G C G T A C C A T G A C T G C G A T A C T G A T C G G A C T A C T G G A T C A C T G
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGCCGGTGGTGCG
CACAGCAGGGGG----
 A C G T A C G T A C G T T G C A T A C G A T G C G T A C C A T G A C T G C G A T A C T G A T C G G A C T A C T G G A T C A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T