Information for 7-WTTTTTAAAA (Motif 18)

G C A T C G A T G A C T G C A T A C G T G A C T T C G A G T C A C G T A T C G A
Reverse Opposite:
A G C T C G A T A C G T A G C T C T G A T G C A C G T A C T G A G C T A C G T A
p-value:1e-4
log p-value:-9.740e+00
Information Content per bp:1.698
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif7.12%
Number of Background Sequences with motif2027.9
Percentage of Background Sequences with motif4.23%
Average Position of motif in Targets52.1 +/- 27.5bp
Average Position of motif in Background48.6 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:WTTTTTAAAA---
---TTTGAAACCG
 G C A T C G A T G A C T G C A T A C G T G A C T T C G A G T C A C G T A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--WTTTTTAAAA---
ANATTTTTGCAANTN
 A C G T A C G T G C A T C G A T G A C T G C A T A C G T G A C T T C G A G T C A C G T A T C G A A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:WTTTTTAAAA
-NATTCAAAT
 G C A T C G A T G A C T G C A T A C G T G A C T T C G A G T C A C G T A T C G A
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------WTTTTTAAAA-
NNNNTTTTTTTTTNAAC
 A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G A T G A C T G C A T A C G T G A C T T C G A G T C A C G T A T C G A A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0187.1_Tcf7_2/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--WTTTTTAAAA---
NNNTTTNTAATACNG
 A C G T A C G T G C A T C G A T G A C T G C A T A C G T G A C T T C G A G T C A C G T A T C G A A C G T A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:WTTTTTAAAA-
-NTTTTACGAC
 G C A T C G A T G A C T G C A T A C G T G A C T T C G A G T C A C G T A T C G A A C G T
A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

PB0148.1_Mtf1_2/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-WTTTTTAAAA---
NNTTTTTCTTATNT
 A C G T G C A T C G A T G A C T G C A T A C G T G A C T T C G A G T C A C G T A T C G A A C G T A C G T A C G T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:WTTTTTAAAA--
--TTTTATTRGN
 G C A T C G A T G A C T G C A T A C G T G A C T T C G A G T C A C G T A T C G A A C G T A C G T
A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:WTTTTTAAAA--
DGWTTTATGRCN
 G C A T C G A T G A C T G C A T A C G T G A C T T C G A G T C A C G T A T C G A A C G T A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

HOXC12/MA0906.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:WTTTTTAAAA--
-NTTTTACGACC
 G C A T C G A T G A C T G C A T A C G T G A C T T C G A G T C A C G T A T C G A A C G T A C G T
A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C