p-value: | 1e-9 |
log p-value: | -2.298e+01 |
Information Content per bp: | 1.810 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.79% |
Number of Background Sequences with motif | 7.5 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 49.0 +/- 30.9bp |
Average Position of motif in Background | 45.0 +/- 25.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0111.1_Nkx2-2/Jaspar
Match Rank: | 1 |
Score: | 0.71 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGGCAAGTGGTCA- NANTTTCAAGTGGTTAN |
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NKX2-3/MA0672.1/Jaspar
Match Rank: | 2 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGGCAAGTGGTCA -NTCAAGTGGN-- |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 3 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGGCAAGTGGTCA TTGCCAAG------ |
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PB0118.1_Esrra_2/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TGGCAAGTGGTCA----- -GGCGAGGGGTCAAGGGC |
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NFIA/MA0670.1/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGGCAAGTGGTCA GGTGCCAAGT----- |
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PH0113.1_Nkx2-4/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGGCAAGTGGTCA- AATTTCAAGTGGCTTN |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 7 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGGCAAGTGGTCA AAGGCAAGTGT--- |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 8 |
Score: | 0.62 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TGGCAAGTGGTCA -----AGRGGTCA |
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NKX2-8/MA0673.1/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGGCAAGTGGTCA -NTCAAGTGG--- |
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NFIC::TLX1/MA0119.1/Jaspar
Match Rank: | 10 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGGCAAGTGGTCA- TGGCACCATGCCAA |
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