Information for 3-TCCTTKCYGGCTGBKK (Motif 5)

G A C T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C T G A C T G A G T C A C G T A T C G A G T C A C G T A C T G
Reverse Opposite:
G T A C G T C A T C A G A T G C C G T A A C T G T A G C A G T C C T G A A C T G G T A C G T C A C T G A A C T G A C T G C T G A
p-value:1e-12
log p-value:-2.992e+01
Information Content per bp:1.759
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.0 +/- 24.5bp
Average Position of motif in Background43.3 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.61
Offset:6
Orientation:forward strand
Alignment:TCCTTKCYGGCTGBKK
------CTGTCTGG--
 G A C T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C T G A C T G A G T C A C G T A T C G A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TCCTTKCYGGCTGBKK
----VBSYGTCTGG--
 G A C T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C T G A C T G A G T C A C G T A T C G A G T C A C G T A C T G
A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCCTTKCYGGCTGBKK
GTCATGCHTGRCTGS--
 A C G T G A C T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C T G A C T G A G T C A C G T A T C G A G T C A C G T A C T G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TCCTTKCYGGCTGBKK
------TWGTCTGV--
 G A C T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C T G A C T G A G T C A C G T A T C G A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TCCTTKCYGGCTGBKK---
--NNTNNTGTCTGGNNTNG
 G A C T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C T G A C T G A G T C A C G T A T C G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TCCTTKCYGGCTGBKK
NNGCACCTTTCTCC------
 A C G T A C G T A C G T A C G T G A C T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C T G A C T G A G T C A C G T A T C G A G T C A C G T A C T G
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TCCTTKCYGGCTGBKK
CCCCCTGCTGTG-----
 A C G T G A C T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C T G A C T G A G T C A C G T A T C G A G T C A C G T A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TCCTTKCYGGCTGBKK
---TTCCCGCCWG---
 G A C T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C T G A C T G A G T C A C G T A T C G A G T C A C G T A C T G
A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TCCTTKCYGGCTGBKK
--CTGTCTGTCACCT-
 G A C T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C T G A C T G A G T C A C G T A T C G A G T C A C G T A C T G
A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:TCCTTKCYGGCTGBKK
----TGCTGACTCA--
 G A C T A G T C A G T C A G C T A C G T A C T G A G T C A G C T A C T G A C T G A G T C A C G T A T C G A G T C A C G T A C T G
A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T