Information for 8-TGGTGGCACC (Motif 17)

C A G T A T C G A C T G C G A T A C T G A T C G A G T C C G T A A G T C A G T C
Reverse Opposite:
C T A G C T A G A C G T A C T G T A G C A G T C C G T A A G T C A T G C G T C A
p-value:1e-8
log p-value:-2.067e+01
Information Content per bp:1.784
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif4.97%
Number of Background Sequences with motif789.4
Percentage of Background Sequences with motif1.68%
Average Position of motif in Targets54.3 +/- 22.6bp
Average Position of motif in Background49.9 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGGTGGCACC
GGTTGGCAT-
 C A G T A T C G A C T G C G A T A C T G A T C G A G T C C G T A A G T C A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TGGTGGCACC--
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T C A G T A T C G A C T G C G A T A C T G A T C G A G T C C G T A A G T C A G T C A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TGGTGGCACC---
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C G T C A G T A T C G A C T G C G A T A C T G A T C G A G T C C G T A A G T C A G T C A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGGTGGCACC
AGGTGTCA--
 C A G T A T C G A C T G C G A T A C T G A T C G A G T C C G T A A G T C A G T C
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGGTGGCACC-
-VBTGWCAGCB
 C A G T A T C G A C T G C G A T A C T G A T C G A G T C C G T A A G T C A G T C A C G T
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGGTGGCACC
NGTGGGCAT-
 C A G T A T C G A C T G C G A T A C T G A T C G A G T C C G T A A G T C A G T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGGTGGCACC-
---TGTCANYT
 C A G T A T C G A C T G C G A T A C T G A T C G A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGGTGGCACC
GGGCGGGACC
 C A G T A T C G A C T G C G A T A C T G A T C G A G T C C G T A A G T C A G T C
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGGTGGCACC
-CTTGGCAA-
 C A G T A T C G A C T G C G A T A C T G A T C G A G T C C G T A A G T C A G T C
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGTGGCACC
AGGTGTGA--
 C A G T A T C G A C T G C G A T A C T G A T C G A G T C C G T A A G T C A G T C
C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T