Information for 23-CAAGGTAAGAGGG (Motif 35)

T A G C T G C A C T G A A C T G A C T G C A G T T G C A T C G A T A C G C G T A C A T G C T A G A C T G
Reverse Opposite:
T G A C G A T C G A T C A C G T A G T C A G C T A C G T G T C A T A G C G T A C G A C T A C G T A T C G
p-value:1e-5
log p-value:-1.336e+01
Information Content per bp:1.664
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif61.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets50.2 +/- 25.1bp
Average Position of motif in Background51.4 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CAAGGTAAGAGGG--
AGGGGTCAGAGGTCA
 T A G C T G C A C T G A A C T G A C T G C A G T T G C A T C G A T A C G C G T A C A T G C T A G A C T G A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CAAGGTAAGAGGG
-CAGGTAAGTAT-
 T A G C T G C A C T G A A C T G A C T G C A G T T G C A T C G A T A C G C G T A C A T G C T A G A C T G
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAAGGTAAGAGGG--
-GAGGTCAAAGGTCA
 T A G C T G C A C T G A A C T G A C T G C A G T T G C A T C G A T A C G C G T A C A T G C T A G A C T G A C G T A C G T
A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAAGGTAAGAGGG--
GTAGGGCAAAGGTCA
 T A G C T G C A C T G A A C T G A C T G C A G T T G C A T C G A T A C G C G T A C A T G C T A G A C T G A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAAGGTAAGAGGG
BTCAAGGTCA-----
 A C G T A C G T T A G C T G C A C T G A A C T G A C T G C A G T T G C A T C G A T A C G C G T A C A T G C T A G A C T G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAAGGTAAGAGGG
TCAAGGTCAN----
 A C G T T A G C T G C A C T G A A C T G A C T G C A G T T G C A T C G A T A C G C G T A C A T G C T A G A C T G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAAGGTAAGAGGG
CAAGGHCANV---
 T A G C T G C A C T G A A C T G A C T G C A G T T G C A T C G A T A C G C G T A C A T G C T A G A C T G
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAAGGTAAGAGGG-------
NGAGGTCANNGAGTTCANNN
 T A G C T G C A C T G A A C T G A C T G C A G T T G C A T C G A T A C G C G T A C A T G C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAAGGTAAGAGGG
NTCAAGGTCA-----
 A C G T A C G T T A G C T G C A C T G A A C T G A C T G C A G T T G C A T C G A T A C G C G T A C A T G C T A G A C T G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAAGGTAAGAGGG--
-TAGGGCAAAGGTCA
 T A G C T G C A C T G A A C T G A C T G C A G T T G C A T C G A T A C G C G T A C A T G C T A G A C T G A C G T A C G T
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A