Information for 9-TTTGGCTTGGAGC (Motif 17)

A C G T A C G T A C G T C T A G A T C G A T G C A G C T C A G T A C T G T A C G C T G A T A C G A T G C
Reverse Opposite:
A T C G A T G C G A C T A T G C T G A C G T C A T C G A T A C G T A G C G A T C T G C A T G C A T C G A
p-value:1e-10
log p-value:-2.403e+01
Information Content per bp:1.469
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.7 +/- 22.7bp
Average Position of motif in Background62.3 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TTTGGCTTGGAGC--
-TTGGCATGGTGCCA
 A C G T A C G T A C G T C T A G A T C G A T G C A G C T C A G T A C T G T A C G C T G A T A C G A T G C A C G T A C G T
A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTTGGCTTGGAGC--
-CTGGCAGNCTGCCA
 A C G T A C G T A C G T C T A G A T C G A T G C A G C T C A G T A C T G T A C G C T G A T A C G A T G C A C G T A C G T
A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTTGGCTTGGAGC---
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T C T A G A T C G A T G C A G C T C A G T A C T G T A C G C T G A T A C G A T G C A C G T A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTTGGCTTGGAGC
-TTGGCA------
 A C G T A C G T A C G T C T A G A T C G A T G C A G C T C A G T A C T G T A C G C T G A T A C G A T G C
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTGGCTTGGAGC
NTTGGCANN----
 A C G T A C G T A C G T C T A G A T C G A T G C A G C T C A G T A C T G T A C G C T G A T A C G A T G C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TTTGGCTTGGAGC
-------CGGAGC
 A C G T A C G T A C G T C T A G A T C G A T G C A G C T C A G T A C T G T A C G C T G A T A C G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTTGGCTTGGAGC-
--TGCCCNGGGGCA
 A C G T A C G T A C G T C T A G A T C G A T G C A G C T C A G T A C T G T A C G C T G A T A C G A T G C A C G T
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTTGGCTTGGAGC-
--TGCCCTNGGGCA
 A C G T A C G T A C G T C T A G A T C G A T G C A G C T C A G T A C T G T A C G C T G A T A C G A T G C A C G T
A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTTGGCTTGGAGC-
--TGCCCTNGGGCA
 A C G T A C G T A C G T C T A G A T C G A T G C A G C T C A G T A C T G T A C G C T G A T A C G A T G C A C G T
A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TTTGGCTTGGAGC
GGGGCTYGKCTGGGA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T C G A T G C A G C T C A G T A C T G T A C G C T G A T A C G A T G C
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T