p-value: | 1e-13 |
log p-value: | -3.196e+01 |
Information Content per bp: | 1.834 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.88% |
Number of Background Sequences with motif | 1.6 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 49.8 +/- 19.9bp |
Average Position of motif in Background | 88.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGTCTCVCAGHGACAC TGTTKCCTAGCAACM- |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGTCTCVCAGHGACAC TGTCTGDCACCT---- |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 3 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGTCTCVCAGHGACAC CTGTCTGTCACCT---- |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 4 |
Score: | 0.52 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TGTCTCVCAGHGACAC -----CACAGN----- |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 5 |
Score: | 0.50 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TGTCTCVCAGHGACAC ----SCCTAGCAACAG |
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Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer
Match Rank: | 6 |
Score: | 0.50 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGTCTCVCAGHGACAC-- --TGACCCAGTGACCTAC |
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PB0158.1_Rfx3_2/Jaspar
Match Rank: | 7 |
Score: | 0.50 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------TGTCTCVCAGHGACAC- NNTNGNNGTAACCAAGNNNNAGN |
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PB0199.1_Zfp161_2/Jaspar
Match Rank: | 8 |
Score: | 0.50 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TGTCTCVCAGHGACAC -GCCGCGCAGTGCGT- |
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PB0195.1_Zbtb3_2/Jaspar
Match Rank: | 9 |
Score: | 0.50 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGTCTCVCAGHGACAC NNNNTGCCAGTGATTG |
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LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer
Match Rank: | 10 |
Score: | 0.49 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGTCTCVCAGHGACAC TGACCTNTAGTAACCC |
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