Information for 15-ACGAGAACAA (Motif 53)

C G T A A G T C A C T G C G T A A C T G C G T A C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C G T A G T C A C G T A G T C A C T G A C G T
p-value:1e-3
log p-value:-9.153e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.7 +/- 33.4bp
Average Position of motif in Background78.2 +/- 5.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ACGAGAACAA-------
AGAAGAACAAAGGACTA
 C G T A A G T C A C T G C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ACGAGAACAA---
NTTNAGAACAATTA
 A C G T C G T A A G T C A C T G C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0072.1_Sox5_1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ACGAGAACAA------
TTTAGAACAATAAAAT
 C G T A A G T C A C T G C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ACGAGAACAA-------
ATAAGAACAAAGGACTA
 C G T A A G T C A C T G C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ACGAGAACAA---
---RNAACAATGG
 C G T A A G T C A C T G C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0063.1_Sox13_1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ACGAGAACAA------
TTAAGAACAATAAATT
 C G T A A G T C A C T G C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0065.1_Sox15_1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ACGAGAACAA-------
TAGTGAACAATAGATTT
 C G T A A G T C A C T G C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ACGAGAACAA--
CAAACAACAACACCT
 A C G T A C G T A C G T C G T A A G T C A C T G C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:ACGAGAACAA-
-----AACAAT
 C G T A A G T C A C T G C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:ACGAGAACAA----
----GAACAATGGN
 C G T A A G T C A C T G C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G