Information for 9-TTGTCATTGG (Motif 42)

G A C T C G A T T A C G A C G T A T G C G C T A A G C T G C A T A C T G T C A G
Reverse Opposite:
A G T C T G A C C G T A T C G A C A G T T A C G T C G A A T G C G C T A C T G A
p-value:1e-7
log p-value:-1.798e+01
Information Content per bp:1.660
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif9.21%
Number of Background Sequences with motif1992.6
Percentage of Background Sequences with motif4.26%
Average Position of motif in Targets48.4 +/- 26.3bp
Average Position of motif in Background49.9 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TTGTCATTGG
YTGWCADY--
 G A C T C G A T T A C G A C G T A T G C G C T A A G C T G C A T A C T G T C A G
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTGTCATTGG
NTGTCAN---
 G A C T C G A T T A C G A C G T A T G C G C T A A G C T G C A T A C T G T C A G
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TTGTCATTGG-----
---TGATTGGCTANN
 G A C T C G A T T A C G A C G T A T G C G C T A A G C T G C A T A C T G T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TTGTCATTGG
--GTCATN--
 G A C T C G A T T A C G A C G T A T G C G C T A A G C T G C A T A C T G T C A G
A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TTGTCATTGG--
--CCGATTGGCT
 G A C T C G A T T A C G A C G T A T G C G C T A A G C T G C A T A C T G T C A G A C G T A C G T
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTGTCATTGG
BNTGDCCTTG-
 A C G T G A C T C G A T T A C G A C G T A T G C G C T A A G C T G C A T A C T G T C A G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

NFYB/MA0502.1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TTGTCATTGG-------
--CTGATTGGTCNATTT
 G A C T C G A T T A C G A C G T A T G C G C T A A G C T G C A T A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGTCATTGG
CCTGTCAA---
 A C G T G A C T C G A T T A C G A C G T A T G C G C T A A G C T G C A T A C T G T C A G
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TTGTCATTGG----
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T G A C T C G A T T A C G A C G T A T G C G C T A A G C T G C A T A C T G T C A G A C G T A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

PB0119.1_Foxa2_2/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTGTCATTGG-
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A C G T G A C T C G A T T A C G A C G T A T G C G C T A A G C T G C A T A C T G T C A G A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T