Information for 7-GACATACATG (Motif 39)

A C T G C G T A A G T C C G T A A C G T C G T A A G T C C T G A A C G T C T A G
Reverse Opposite:
A G T C C G T A A G C T A C T G A C G T C G T A A C G T A C T G A C G T A G T C
p-value:1e-8
log p-value:-1.888e+01
Information Content per bp:1.938
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.5 +/- 17.8bp
Average Position of motif in Background66.3 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GACATACATG-----
-ACATTCATGACACG
 A C T G C G T A A G T C C G T A A C G T C G T A A G T C C T G A A C G T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GACATACATG----
GACCACATTCATACAAT
 A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T C G T A A G T C C T G A A C G T C T A G A C G T A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PH0082.1_Irx2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GACATACATG-------
TAAATACATGTAAAATT
 A C T G C G T A A G T C C G T A A C G T C G T A A G T C C T G A A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GACATACATG-------
AATATACATGTAAAATT
 A C T G C G T A A G T C C G T A A C G T C G T A A G T C C T G A A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GACATACATG-------
AAAATACATGTAATACT
 A C T G C G T A A G T C C G T A A C G T C G T A A G T C C T G A A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GACATACATG-------
AAAATACATGTAAAAAT
 A C T G C G T A A G T C C G T A A C G T C G T A A G T C C T G A A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PH0084.1_Irx3_2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GACATACATG-------
AATATACATGTAATATA
 A C T G C G T A A G T C C G T A A C G T C G T A A G T C C T G A A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GACATACATG-
---RTACGTGC
 A C T G C G T A A G T C C G T A A C G T C G T A A G T C C T G A A C G T C T A G A C G T
A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C

NEUROG2/MA0669.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GACATACATG
GACATATGTT
 A C T G C G T A A G T C C G T A A C G T C G T A A G T C C T G A A C G T C T A G
C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GACATACATG--
TTGACCTANTTATN
 A C G T A C G T A C T G C G T A A G T C C G T A A C G T C G T A A G T C C T G A A C G T C T A G A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A