Information for 12-WTRGTCTGWRGTT (Motif 27)

C G T A A C G T C T G A C A T G C G A T A G T C A C G T A C T G C G T A C T G A T C A G C G A T A C G T
Reverse Opposite:
C G T A C G T A A G T C A G C T G C A T A G T C C G T A A C T G G C T A G T A C A G C T T G C A G C A T
p-value:1e-10
log p-value:-2.324e+01
Information Content per bp:1.743
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif43.5
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets51.3 +/- 24.3bp
Average Position of motif in Background52.4 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:WTRGTCTGWRGTT-
---GTCTGTGGTTT
 C G T A A C G T C T G A C A T G C G A T A G T C A C G T A C T G C G T A C T G A T C A G C G A T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.68
Offset:4
Orientation:forward strand
Alignment:WTRGTCTGWRGTT-
----GCTGTGGTTT
 C G T A A C G T C T G A C A T G C G A T A G T C A C G T A C T G C G T A C T G A T C A G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:WTRGTCTGWRGTT--
-----CTGTGGTTTN
 C G T A A C G T C T G A C A T G C G A T A G T C A C G T A C T G C G T A C T G A T C A G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:WTRGTCTGWRGTT-
----NNTGTGGTTT
 C G T A A C G T C T G A C A T G C G A T A G T C A C G T A C T G C G T A C T G A T C A G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:WTRGTCTGWRGTT--
---NNHTGTGGTTWN
 C G T A A C G T C T G A C A T G C G A T A G T C A C G T A C T G C G T A C T G A T C A G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:WTRGTCTGWRGTT
-TWGTCTGV----
 C G T A A C G T C T G A C A T G C G A T A G T C A C G T A C T G C G T A C T G A T C A G C G A T A C G T
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:WTRGTCTGWRGTT-
---TGCTGTGATTT
 C G T A A C G T C T G A C A T G C G A T A G T C A C G T A C T G C G T A C T G A T C A G C G A T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:WTRGTCTGWRGTT-
----TTTGCGGTTT
 C G T A A C G T C T G A C A T G C G A T A G T C A C G T A C T G C G T A C T G A T C A G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:WTRGTCTGWRGTT-
-----TTGCGGTTT
 C G T A A C G T C T G A C A T G C G A T A G T C A C G T A C T G C G T A C T G A T C A G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:WTRGTCTGWRGTT
--GGTCTGGCAT-
 C G T A A C G T C T G A C A T G C G A T A G T C A C G T A C T G C G T A C T G A T C A G C G A T A C G T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T