Information for 9-AHATSACYTRRCT (Motif 22)

T C G A G C A T C T G A C A G T A T C G G C T A G A T C G A T C G C A T C T G A T C A G G T A C G C A T
Reverse Opposite:
C G T A C A T G A G T C G A C T C G T A C T A G C T A G C G A T T A G C G T C A G A C T C G T A A G C T
p-value:1e-10
log p-value:-2.428e+01
Information Content per bp:1.445
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif4.39%
Number of Background Sequences with motif461.1
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets57.4 +/- 25.0bp
Average Position of motif in Background48.7 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA/MA0071.1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AHATSACYTRRCT
---TGACCTTGAT
 T C G A G C A T C T G A C A G T A T C G G C T A G A T C G A T C G C A T C T G A T C A G G T A C G C A T
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AHATSACYTRRCT
---TGACCTARTT
 T C G A G C A T C T G A C A G T A T C G G C T A G A T C G A T C G C A T C T G A T C A G G T A C G C A T
A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AHATSACYTRRCT
-CATGAC------
 T C G A G C A T C T G A C A G T A T C G G C T A G A T C G A T C G C A T C T G A T C A G G T A C G C A T
A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AHATSACYTRRCT
--ATGACCTTGAA
 T C G A G C A T C T G A C A G T A T C G G C T A G A T C G A T C G C A T C T G A T C A G G T A C G C A T
A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AHATSACYTRRCT
---TGACCT----
 T C G A G C A T C T G A C A G T A T C G G C T A G A T C G A T C G C A T C T G A T C A G G T A C G C A T
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AHATSACYTRRCT---
--TTGACCTANTTATN
 T C G A G C A T C T G A C A G T A T C G G C T A G A T C G A T C G C A T C T G A T C A G G T A C G C A T A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AHATSACYTRRCT
-NATGACCTTGA-
 T C G A G C A T C T G A C A G T A T C G G C T A G A T C G A T C G C A T C T G A T C A G G T A C G C A T
A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AHATSACYTRRCT
CAGCATGACTCAGCA
 A C G T A C G T T C G A G C A T C T G A C A G T A T C G G C T A G A T C G A T C G C A T C T G A T C A G G T A C G C A T
G T A C C T G A T A C G T G A C T C G A A C G T A C T G C G T A A T G C G C A T G A T C C T G A T A C G A T G C C G T A

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AHATSACYTRRCT--
NNNNATGACCTTGANTN
 A C G T A C G T T C G A G C A T C T G A C A G T A T C G G C T A G A T C G A T C G C A T C T G A T C A G G T A C G C A T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AHATSACYTRRCT-
--ATGACTCAGCAD
 T C G A G C A T C T G A C A G T A T C G G C T A G A T C G A T C G C A T C T G A T C A G G T A C G C A T A C G T
A C G T A C G T T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T