p-value: | 1e-11 |
log p-value: | -2.594e+01 |
Information Content per bp: | 1.814 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.73% |
Number of Background Sequences with motif | 1.5 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 41.0 +/- 19.3bp |
Average Position of motif in Background | 59.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | SMSAGGRMARGGRAYA --TAGGGCAAAGGTCA |
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Pparg::Rxra/MA0065.2/Jaspar
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | SMSAGGRMARGGRAYA -GTAGGGCAAAGGTCA |
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NR2C2/MA0504.1/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | SMSAGGRMARGGRAYA -AGGGGTCAGAGGTCA |
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TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | SMSAGGRMARGGRAYA --GAGGTCAAAGGTCA |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | SMSAGGRMARGGRAYA -TRAGGTCA------- |
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AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | SMSAGGRMARGGRAYA- -------CCAGGAACAG |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | SMSAGGRMARGGRAYA CAAAGGTCAG------ |
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PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | SMSAGGRMARGGRAYA --TGGGGCAAAGGTCA |
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RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | SMSAGGRMARGGRAYA ---AGGTCAAGGTCA- |
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NR2F1/MA0017.2/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | SMSAGGRMARGGRAYA CAAAGGTCAAGGG--- |
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