Information for 4-AGATTAYAATCTH (Motif 5)

C T G A A C T G C G T A A C G T C G A T C T G A G A C T G C T A C G T A C G A T A T G C A G C T G A C T
Reverse Opposite:
C T G A C T G A A T C G C G T A A C G T C G A T C T G A G A C T G C T A C G T A G A C T A G T C G A C T
p-value:1e-21
log p-value:-5.005e+01
Information Content per bp:1.714
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif44.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets51.8 +/- 27.0bp
Average Position of motif in Background47.8 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-AGATTAYAATCTH-
NAGATWNBNATCTNN
 A C G T C T G A A C T G C G T A A C G T C G A T C T G A G A C T G C T A C G T A C G A T A T G C A G C T G A C T A C G T
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AGATTAYAATCTH-
NCGTATTATAATCNTA
 A C G T A C G T C T G A A C T G C G T A A C G T C G A T C T G A G A C T G C T A C G T A C G A T A T G C A G C T G A C T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGATTAYAATCTH-
TATAATTATAATATTC
 A C G T A C G T C T G A A C T G C G T A A C G T C G A T C T G A G A C T G C T A C G T A C G A T A T G C A G C T G A C T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

GATA2/MA0036.2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGATTAYAATCTH
NCAGATAAGAANNN-
 A C G T A C G T C T G A A C T G C G T A A C G T C G A T C T G A G A C T G C T A C G T A C G A T A T G C A G C T G A C T
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGATTAYAATCTH-
TTTAATTATAATTAAG
 A C G T A C G T C T G A A C T G C G T A A C G T C G A T C T G A G A C T G C T A C G T A C G A T A T G C A G C T G A C T A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

PB0064.1_Sox14_1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGATTAYAATCTH-
GCTAATTATAATTATC
 A C G T A C G T C T G A A C T G C G T A A C G T C G A T C T G A G A C T G C T A C G T A C G A T A T G C A G C T G A C T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

GATA5/MA0766.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGATTAYAATCTH
AGATAAGA-----
 C T G A A C T G C G T A A C G T C G A T C T G A G A C T G C T A C G T A C G A T A T G C A G C T G A C T
G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGATTAYAATCTH
AGATAASR-----
 C T G A A C T G C G T A A C G T C G A T C T G A G A C T G C T A C G T A C G A T A T G C A G C T G A C T
G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGATTAYAATCTH
RGGATTAR------
 A C G T C T G A A C T G C G T A A C G T C G A T C T G A G A C T G C T A C G T A C G A T A T G C A G C T G A C T
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGATTAYAATCTH
NGGATTAA------
 A C G T C T G A A C T G C G T A A C G T C G A T C T G A G A C T G C T A C G T A C G A T A T G C A G C T G A C T
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T