Information for 17-AGATAAACTTTAD (Motif 25)

C G T A C T A G C G T A C G A T C G T A C G T A C G T A A T G C A C G T A C G T A C G T C G T A C A G T
Reverse Opposite:
G C T A C G A T C G T A C G T A C G T A A T C G A C G T A C G T A C G T C G T A A C G T G A T C C G A T
p-value:1e-6
log p-value:-1.533e+01
Information Content per bp:1.847
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets72.0 +/- 13.1bp
Average Position of motif in Background14.8 +/- 2.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGATAAACTTTAD
-AATAAACAATN-
 C G T A C T A G C G T A C G A T C G T A C G T A C G T A A T G C A C G T A C G T A C G T C G T A C A G T
A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGATAAACTTTAD
GGTTAAACATTAA
 C G T A C T A G C G T A C G A T C G T A C G T A C G T A A T G C A C G T A C G T A C G T C G T A C A G T
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGATAAACTTTAD
AGATAASR-----
 C G T A C T A G C G T A C G A T C G T A C G T A C G T A A T G C A C G T A C G T A C G T C G T A C A G T
G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGATAAACTTTAD
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A C G A T C G T A C G T A C G T A A T G C A C G T A C G T A C G T C G T A C A G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PB0023.1_Gata6_1/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AGATAAACTTTAD
TATAGAGATAAGAATTG-
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G T A C G A T C G T A C G T A C G T A A T G C A C G T A C G T A C G T C G T A C A G T
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G A C G T

GATA3/MA0037.2/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGATAAACTTTAD
AGATAAGA-----
 C G T A C T A G C G T A C G A T C G T A C G T A C G T A A T G C A C G T A C G T A C G T C G T A C A G T
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AGATAAACTTTAD
AAAGGTAATAAAATTT--
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G T A C G A T C G T A C G T A C G T A A T G C A C G T A C G T A C G T C G T A C A G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGATAAACTTTAD
TAGGTAATAAAATTCA-
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A C G A T C G T A C G T A C G T A A T G C A C G T A C G T A C G T C G T A C A G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T

GATA2/MA0036.2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGATAAACTTTAD
NCAGATAAGAANNN-
 A C G T A C G T C G T A C T A G C G T A C G A T C G T A C G T A C G T A A T G C A C G T A C G T A C G T C G T A C A G T
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGATAAACTTTAD
AGATAAGA-----
 C G T A C T A G C G T A C G A T C G T A C G T A C G T A A T G C A C G T A C G T A C G T C G T A C A G T
G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T