Information for 1-AACMDGYHMARCMDGT (Motif 2)

C T G A C T G A T A G C G T C A C T A G C T A G G A T C G A T C T G C A C T G A T C G A A G T C G T A C C A G T A C T G G C A T
Reverse Opposite:
C G T A A G T C G T C A C A T G A C T G A G C T G A C T A C G T C T A G C T A G A G T C G A C T C A G T A T C G G A C T G A C T
p-value:1e-55
log p-value:-1.267e+02
Information Content per bp:1.564
Number of Target Sequences with motif87.0
Percentage of Target Sequences with motif11.31%
Number of Background Sequences with motif555.2
Percentage of Background Sequences with motif1.17%
Average Position of motif in Targets50.9 +/- 24.3bp
Average Position of motif in Background50.5 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:1
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--AACMDGYHMARCMDGT--
VAAACYKGTHWAACMRGTTT
 A C G T A C G T C T G A C T G A T A G C G T C A C T A G C T A G G A T C G A T C T G C A C T G A T C G A A G T C G T A C C A G T A C T G G C A T A C G T A C G T
T C G A C T G A C T G A C G T A T A G C G A C T C A T G T C A G G C A T G C A T C G T A C T G A C T G A A G T C G T A C C T A G A T C G G A C T G A C T A G C T

TFCP2/MA0145.3/Jaspar

Match Rank:2
Score:0.58
Offset:8
Orientation:forward strand
Alignment:AACMDGYHMARCMDGT--
--------AAACCGGTTT
 C T G A C T G A T A G C G T C A C T A G C T A G G A T C G A T C T G C A C T G A T C G A A G T C G T A C C A G T A C T G G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T

GRHL1/MA0647.1/Jaspar

Match Rank:3
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AACMDGYHMARCMDGT---
-------AAAACCGGTTTT
 C T G A C T G A T A G C G T C A C T A G C T A G G A T C G A T C T G C A C T G A T C G A A G T C G T A C C A G T A C T G G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.54
Offset:9
Orientation:forward strand
Alignment:AACMDGYHMARCMDGT--
---------AACAGGTGT
 C T G A C T G A T A G C G T C A C T A G C T A G G A T C G A T C T G C A C T G A T C G A A G T C G T A C C A G T A C T G G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AACMDGYHMARCMDGT-
--SCAGYCADGCATGAC
 C T G A C T G A T A G C G T C A C T A G C T A G G A T C G A T C T G C A C T G A T C G A A G T C G T A C C A G T A C T G G C A T A C G T
A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PH0083.1_Irx3_1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AACMDGYHMARCMDGT-----
----ANTATTACATGTANNNN
 C T G A C T G A T A G C G T C A C T A G C T A G G A T C G A T C T G C A C T G A T C G A A G T C G T A C C A G T A C T G G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AACMDGYHMARCMDGT-----
----ANTNNTACATGTANNTN
 C T G A C T G A T A G C G T C A C T A G C T A G G A T C G A T C T G C A C T G A T C G A A G T C G T A C C A G T A C T G G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AACMDGYHMARCMDGT-----
----NNTTTTACATGTANNNT
 C T G A C T G A T A G C G T C A C T A G C T A G G A T C G A T C T G C A C T G A T C G A A G T C G T A C C A G T A C T G G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---AACMDGYHMARCMDGT-
NAAACCGGTTNNAACCGGTT
 A C G T A C G T A C G T C T G A C T G A T A G C G T C A C T A G C T A G G A T C G A T C T G C A C T G A T C G A A G T C G T A C C A G T A C T G G C A T A C G T
T G A C T C G A C T G A C T G A A T G C G A T C C T A G T A C G G A C T G A C T G A T C T C G A C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AACMDGYHMARCMDGT--
--GCAGCCAAGCGTGACN
 C T G A C T G A T A G C G T C A C T A G C T A G G A T C G A T C T G C A C T G A T C G A A G T C G T A C C A G T A C T G G C A T A C G T A C G T
A C G T A C G T A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C