Information for 6-KRAAACACAGAGMWDK (Motif 13)

A C T G C T G A C G T A C G T A G C T A A T G C C G T A A G T C G C T A A T C G G C T A C T A G T G C A C G A T C T G A A C T G
Reverse Opposite:
G T A C G A C T G C T A A C G T A G T C C G A T A T G C C G A T A C T G C G A T A T C G C G A T A C G T A C G T A G C T T G A C
p-value:1e-12
log p-value:-2.801e+01
Information Content per bp:1.695
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif54.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets52.5 +/- 28.5bp
Average Position of motif in Background54.4 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:KRAAACACAGAGMWDK
-AAACCACAGC-----
 A C T G C T G A C G T A C G T A G C T A A T G C C G T A A G T C G C T A A T C G G C T A C T A G T G C A C G A T C T G A A C T G
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:KRAAACACAGAGMWDK
NAAACCACAG------
 A C T G C T G A C G T A C G T A G C T A A T G C C G T A A G T C G C T A A T C G G C T A C T A G T G C A C G A T C T G A A C T G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:KRAAACACAGAGMWDK
-AAACCACAGAN----
 A C T G C T G A C G T A C G T A G C T A A T G C C G T A A G T C G C T A A T C G G C T A C T A G T G C A C G A T C T G A A C T G
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:KRAAACACAGAGMWDK
-AAACCACANN-----
 A C T G C T G A C G T A C G T A G C T A A T G C C G T A A G T C G C T A A T C G G C T A C T A G T G C A C G A T C T G A A C T G
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----KRAAACACAGAGMWDK
CAAAAGTAAACAAAG------
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A C G T A C G T A G C T A A T G C C G T A A G T C G C T A A T C G G C T A C T A G T G C A C G A T C T G A A C T G
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:KRAAACACAGAGMWDK
-AAATCACAGCA----
 A C T G C T G A C G T A C G T A G C T A A T G C C G T A A G T C G C T A A T C G G C T A C T A G T G C A C G A T C T G A A C T G
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:KRAAACACAGAGMWDK
CAAATCACTG------
 A C T G C T G A C G T A C G T A G C T A A T G C C G T A A G T C G C T A A T C G G C T A C T A G T G C A C G A T C T G A A C T G
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:KRAAACACAGAGMWDK
NWAACCACADNN----
 A C T G C T G A C G T A C G T A G C T A A T G C C G T A A G T C G C T A A T C G G C T A C T A G T G C A C G A T C T G A A C T G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:KRAAACACAGAGMWDK
-AAATCACTGC-----
 A C T G C T G A C G T A C G T A G C T A A T G C C G T A A G T C G C T A A T C G G C T A C T A G T G C A C G A T C T G A A C T G
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--KRAAACACAGAGMWDK
AAGTAAACAAA-------
 A C G T A C G T A C T G C T G A C G T A C G T A G C T A A T G C C G T A A G T C G C T A A T C G G C T A C T A G T G C A C G A T C T G A A C T G
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T