Information for 4-CCCTCCGGGG (Motif 6)

A G T C A T G C G T A C A C G T A G T C G T A C C T A G A T C G T A C G C T A G
Reverse Opposite:
G A T C A T G C T A G C G A T C C A T G A C T G C G T A C A T G T A C G A C T G
p-value:1e-12
log p-value:-2.870e+01
Information Content per bp:1.822
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.14%
Number of Background Sequences with motif252.8
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets52.9 +/- 25.5bp
Average Position of motif in Background49.2 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0103.1_Zic3_1/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCCGGGG---
NCCCCCCCGGGGGGN
 A C G T A C G T A G T C A T G C G T A C A C G T A G T C G T A C C T A G A T C G T A C G C T A G A C G T A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCCGGGG---
ACCCCCCCGGGGGGN
 A C G T A C G T A G T C A T G C G T A C A C G T A G T C G T A C C T A G A T C G T A C G C T A G A C G T A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CCCTCCGGGG---
CCCCCCCGGGGGNN
 A C G T A G T C A T G C G T A C A C G T A G T C G T A C C T A G A T C G T A C G C T A G A C G T A C G T A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CCCTCCGGGG--
ATTCCCTGAGGGGAA
 A C G T A C G T A C G T A G T C A T G C G T A C A C G T A G T C G T A C C T A G A T C G T A C G C T A G A C G T A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCCTCCGGGG-
TGCCCTGAGGGCA
 A C G T A C G T A G T C A T G C G T A C A C G T A G T C G T A C C T A G A T C G T A C G C T A G A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCCTCCGGGG-
TGCCCTGAGGGCA
 A C G T A C G T A G T C A T G C G T A C A C G T A G T C G T A C C T A G A T C G T A C G C T A G A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCCTCCGGGG--
NTCGCCTCAGGCAAT
 A C G T A C G T A C G T A G T C A T G C G T A C A C G T A G T C G T A C C T A G A T C G T A C G C T A G A C G T A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCCGGGG-
TGCCCTNAGGGCA
 A C G T A C G T A G T C A T G C G T A C A C G T A G T C G T A C C T A G A T C G T A C G C T A G A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCCTCCGGGG
WTGSCCTSAGGS-
 A C G T A C G T A C G T A G T C A T G C G T A C A C G T A G T C G T A C C T A G A T C G T A C G C T A G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCCTCCGGGG
ATGCCCTGAGGC-
 A C G T A C G T A C G T A G T C A T G C G T A C A C G T A G T C G T A C C T A G A T C G T A C G C T A G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T