Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-244 | -5.637e+02 | 0.0000 | 242.0 | 31.15% | 655.7 | 1.39% | motif file (matrix) |
svg |
2 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-53 | -1.222e+02 | 0.0000 | 396.0 | 50.97% | 11826.0 | 25.10% | motif file (matrix) |
svg |
3 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-49 | -1.147e+02 | 0.0000 | 234.0 | 30.12% | 4968.0 | 10.54% | motif file (matrix) |
svg |
4 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-36 | -8.367e+01 | 0.0000 | 126.0 | 16.22% | 2026.7 | 4.30% | motif file (matrix) |
svg |
5 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-35 | -8.232e+01 | 0.0000 | 142.0 | 18.28% | 2566.1 | 5.45% | motif file (matrix) |
svg |
6 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-34 | -7.878e+01 | 0.0000 | 125.0 | 16.09% | 2100.2 | 4.46% | motif file (matrix) |
svg |
7 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-27 | -6.384e+01 | 0.0000 | 102.0 | 13.13% | 1713.3 | 3.64% | motif file (matrix) |
svg |
8 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-23 | -5.475e+01 | 0.0000 | 94.0 | 12.10% | 1671.8 | 3.55% | motif file (matrix) |
svg |
9 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-18 | -4.306e+01 | 0.0000 | 49.0 | 6.31% | 598.8 | 1.27% | motif file (matrix) |
svg |
10 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-18 | -4.301e+01 | 0.0000 | 35.0 | 4.50% | 286.6 | 0.61% | motif file (matrix) |
svg |
11 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-18 | -4.233e+01 | 0.0000 | 186.0 | 23.94% | 5806.2 | 12.32% | motif file (matrix) |
svg |
12 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-15 | -3.509e+01 | 0.0000 | 89.0 | 11.45% | 2073.9 | 4.40% | motif file (matrix) |
svg |
13 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-13 | -3.072e+01 | 0.0000 | 63.0 | 8.11% | 1281.5 | 2.72% | motif file (matrix) |
svg |
14 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-13 | -3.032e+01 | 0.0000 | 31.0 | 3.99% | 342.1 | 0.73% | motif file (matrix) |
svg |
15 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-12 | -2.867e+01 | 0.0000 | 89.0 | 11.45% | 2325.3 | 4.94% | motif file (matrix) |
svg |
16 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-12 | -2.823e+01 | 0.0000 | 71.0 | 9.14% | 1648.2 | 3.50% | motif file (matrix) |
svg |
17 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-11 | -2.736e+01 | 0.0000 | 115.0 | 14.80% | 3477.3 | 7.38% | motif file (matrix) |
svg |
18 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-11 | -2.597e+01 | 0.0000 | 26.0 | 3.35% | 283.5 | 0.60% | motif file (matrix) |
svg |
19 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-11 | -2.536e+01 | 0.0000 | 27.0 | 3.47% | 315.1 | 0.67% | motif file (matrix) |
svg |
20 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-10 | -2.401e+01 | 0.0000 | 77.0 | 9.91% | 2049.5 | 4.35% | motif file (matrix) |
svg |
21 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-10 | -2.385e+01 | 0.0000 | 66.0 | 8.49% | 1624.5 | 3.45% | motif file (matrix) |
svg |
22 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-10 | -2.362e+01 | 0.0000 | 39.0 | 5.02% | 683.4 | 1.45% | motif file (matrix) |
svg |
23 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-10 | -2.346e+01 | 0.0000 | 79.0 | 10.17% | 2155.8 | 4.58% | motif file (matrix) |
svg |
24 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-10 | -2.323e+01 | 0.0000 | 41.0 | 5.28% | 757.0 | 1.61% | motif file (matrix) |
svg |
25 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-9 | -2.239e+01 | 0.0000 | 41.0 | 5.28% | 778.6 | 1.65% | motif file (matrix) |
svg |
26 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-9 | -2.210e+01 | 0.0000 | 62.0 | 7.98% | 1540.0 | 3.27% | motif file (matrix) |
svg |
27 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-9 | -2.200e+01 | 0.0000 | 30.0 | 3.86% | 450.2 | 0.96% | motif file (matrix) |
svg |
28 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-9 | -2.183e+01 | 0.0000 | 66.0 | 8.49% | 1707.2 | 3.62% | motif file (matrix) |
svg |
29 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-9 | -2.182e+01 | 0.0000 | 48.0 | 6.18% | 1033.6 | 2.19% | motif file (matrix) |
svg |
30 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-9 | -2.180e+01 | 0.0000 | 52.0 | 6.69% | 1177.8 | 2.50% | motif file (matrix) |
svg |
31 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-8 | -2.057e+01 | 0.0000 | 53.0 | 6.82% | 1258.7 | 2.67% | motif file (matrix) |
svg |
32 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-8 | -1.996e+01 | 0.0000 | 27.0 | 3.47% | 405.7 | 0.86% | motif file (matrix) |
svg |
33 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-8 | -1.886e+01 | 0.0000 | 56.0 | 7.21% | 1441.1 | 3.06% | motif file (matrix) |
svg |
34 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-7 | -1.794e+01 | 0.0000 | 12.0 | 1.54% | 80.2 | 0.17% | motif file (matrix) |
svg |
35 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-7 | -1.777e+01 | 0.0000 | 55.0 | 7.08% | 1449.9 | 3.08% | motif file (matrix) |
svg |
36 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-7 | -1.755e+01 | 0.0000 | 51.0 | 6.56% | 1301.6 | 2.76% | motif file (matrix) |
svg |
37 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-6 | -1.564e+01 | 0.0000 | 43.0 | 5.53% | 1071.3 | 2.27% | motif file (matrix) |
svg |
38 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-6 | -1.542e+01 | 0.0000 | 25.0 | 3.22% | 444.1 | 0.94% | motif file (matrix) |
svg |
39 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-6 | -1.521e+01 | 0.0000 | 83.0 | 10.68% | 2795.7 | 5.93% | motif file (matrix) |
svg |
40 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.505e+01 | 0.0000 | 68.0 | 8.75% | 2134.9 | 4.53% | motif file (matrix) |
svg |
41 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-6 | -1.494e+01 | 0.0000 | 52.0 | 6.69% | 1460.3 | 3.10% | motif file (matrix) |
svg |
42 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-6 | -1.468e+01 | 0.0000 | 26.0 | 3.35% | 495.4 | 1.05% | motif file (matrix) |
svg |
43 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-5 | -1.285e+01 | 0.0000 | 55.0 | 7.08% | 1699.4 | 3.61% | motif file (matrix) |
svg |
44 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-5 | -1.206e+01 | 0.0000 | 110.0 | 14.16% | 4353.6 | 9.24% | motif file (matrix) |
svg |
45 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-5 | -1.202e+01 | 0.0000 | 228.0 | 29.34% | 10611.3 | 22.52% | motif file (matrix) |
svg |
46 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-5 | -1.172e+01 | 0.0001 | 9.0 | 1.16% | 78.2 | 0.17% | motif file (matrix) |
svg |
47 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-4 | -1.068e+01 | 0.0002 | 31.0 | 3.99% | 814.0 | 1.73% | motif file (matrix) |
svg |
48 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.003e+01 | 0.0003 | 9.0 | 1.16% | 97.3 | 0.21% | motif file (matrix) |
svg |
49 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-4 | -9.807e+00 | 0.0004 | 41.0 | 5.28% | 1273.3 | 2.70% | motif file (matrix) |
svg |
50 |
| GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -9.713e+00 | 0.0004 | 11.0 | 1.42% | 152.0 | 0.32% | motif file (matrix) |
svg |
51 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-4 | -9.553e+00 | 0.0005 | 20.0 | 2.57% | 443.8 | 0.94% | motif file (matrix) |
svg |
52 |
| GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -9.431e+00 | 0.0006 | 11.0 | 1.42% | 157.6 | 0.33% | motif file (matrix) |
svg |
53 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-3 | -8.865e+00 | 0.0010 | 47.0 | 6.05% | 1601.2 | 3.40% | motif file (matrix) |
svg |
54 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-3 | -8.689e+00 | 0.0011 | 56.0 | 7.21% | 2032.9 | 4.31% | motif file (matrix) |
svg |
55 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -8.646e+00 | 0.0012 | 11.0 | 1.42% | 172.6 | 0.37% | motif file (matrix) |
svg |
56 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-3 | -8.230e+00 | 0.0017 | 31.0 | 3.99% | 935.7 | 1.99% | motif file (matrix) |
svg |
57 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -7.983e+00 | 0.0022 | 32.0 | 4.12% | 992.2 | 2.11% | motif file (matrix) |
svg |
58 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-3 | -7.820e+00 | 0.0025 | 7.0 | 0.90% | 79.6 | 0.17% | motif file (matrix) |
svg |
59 |
| RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer | 1e-3 | -7.820e+00 | 0.0025 | 7.0 | 0.90% | 79.0 | 0.17% | motif file (matrix) |
svg |
60 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-3 | -7.815e+00 | 0.0025 | 21.0 | 2.70% | 546.7 | 1.16% | motif file (matrix) |
svg |
61 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-3 | -7.032e+00 | 0.0053 | 69.0 | 8.88% | 2825.3 | 6.00% | motif file (matrix) |
svg |
62 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-2 | -6.885e+00 | 0.0060 | 25.0 | 3.22% | 756.0 | 1.60% | motif file (matrix) |
svg |
63 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-2 | -6.649e+00 | 0.0075 | 110.0 | 14.16% | 5009.8 | 10.63% | motif file (matrix) |
svg |
64 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-2 | -6.316e+00 | 0.0103 | 55.0 | 7.08% | 2202.8 | 4.68% | motif file (matrix) |
svg |
65 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-2 | -5.963e+00 | 0.0144 | 198.0 | 25.48% | 10004.5 | 21.23% | motif file (matrix) |
svg |
66 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-2 | -5.919e+00 | 0.0148 | 34.0 | 4.38% | 1223.4 | 2.60% | motif file (matrix) |
svg |
67 |
| p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer | 1e-2 | -5.892e+00 | 0.0150 | 22.0 | 2.83% | 683.4 | 1.45% | motif file (matrix) |
svg |
68 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.610e+00 | 0.0196 | 33.0 | 4.25% | 1201.3 | 2.55% | motif file (matrix) |
svg |
69 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-2 | -5.407e+00 | 0.0237 | 36.0 | 4.63% | 1361.4 | 2.89% | motif file (matrix) |
svg |
70 |
| Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.381e+00 | 0.0239 | 11.0 | 1.42% | 260.8 | 0.55% | motif file (matrix) |
svg |
71 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-2 | -5.350e+00 | 0.0243 | 41.0 | 5.28% | 1609.9 | 3.42% | motif file (matrix) |
svg |
72 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-2 | -5.342e+00 | 0.0243 | 50.0 | 6.44% | 2057.9 | 4.37% | motif file (matrix) |
svg |
73 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.329e+00 | 0.0243 | 62.0 | 7.98% | 2670.7 | 5.67% | motif file (matrix) |
svg |
74 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.299e+00 | 0.0246 | 41.0 | 5.28% | 1614.6 | 3.43% | motif file (matrix) |
svg |
75 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.104e+00 | 0.0295 | 22.0 | 2.83% | 732.4 | 1.55% | motif file (matrix) |
svg |
76 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-2 | -4.949e+00 | 0.0340 | 106.0 | 13.64% | 5074.1 | 10.77% | motif file (matrix) |
svg |
77 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -4.757e+00 | 0.0406 | 62.0 | 7.98% | 2746.3 | 5.83% | motif file (matrix) |
svg |
78 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-2 | -4.700e+00 | 0.0425 | 193.0 | 24.84% | 10014.0 | 21.25% | motif file (matrix) |
svg |