Information for 5-ACAGTGWCSYTWG (Motif 6)

C G T A A T G C C G T A A T C G A G C T A C T G C G T A A G T C A T G C A G T C A C G T C G A T A C T G
Reverse Opposite:
A G T C C G T A C G T A C T A G A T C G A C T G C G A T A G T C C T G A A T G C A C G T A T C G A C G T
p-value:1e-14
log p-value:-3.246e+01
Information Content per bp:1.871
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.8 +/- 25.2bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ACAGTGWCSYTWG
---CTGACCTTTG
 C G T A A T G C C G T A A T C G A G C T A C T G C G T A A G T C A T G C A G T C A C G T C G A T A C T G
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ACAGTGWCSYTWG
---GTGACCTT--
 C G T A A T G C C G T A A T C G A G C T A C T G C G T A A G T C A T G C A G T C A C G T C G A T A C T G
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACAGTGWCSYTWG---
NNNGTGACCTTTGNNN
 C G T A A T G C C G T A A T C G A G C T A C T G C G T A A G T C A T G C A G T C A C G T C G A T A C T G A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACAGTGWCSYTWG---
NNNNTGACCTTTNNNN
 C G T A A T G C C G T A A T C G A G C T A C T G C G T A A G T C A T G C A G T C A C G T C G A T A C T G A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ACAGTGWCSYTWG
---NTGACCTTGA
 C G T A A T G C C G T A A T C G A G C T A C T G C G T A A G T C A T G C A G T C A C G T C G A T A C T G
A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ACAGTGWCSYTWG
----TGACCTYA-
 C G T A A T G C C G T A A T C G A G C T A C T G C G T A A G T C A T G C A G T C A C G T C G A T A C T G
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ACAGTGWCSYTWG---
----TGACCTTTNCNT
 C G T A A T G C C G T A A T C G A G C T A C T G C G T A A G T C A T G C A G T C A C G T C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ACAGTGWCSYTWG
CNNTTGACCTTTG
 C G T A A T G C C G T A A T C G A G C T A C T G C G T A A G T C A T G C A G T C A C G T C G A T A C T G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Nr2f6/MA0677.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ACAGTGWCSYTWG-----
----TGACCTTTGACCTN
 C G T A A T G C C G T A A T C G A G C T A C T G C G T A A G T C A T G C A G T C A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACAGTGWCSYTWG
AGGTCANTGACCTN--
 A C G T A C G T A C G T C G T A A T G C C G T A A T C G A G C T A C T G C G T A A G T C A T G C A G T C A C G T C G A T A C T G
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T A C G T