Information for 3-YAACCTGMCC (Motif 2)

G A C T C T G A C T G A T G A C G T A C C G A T A T C G T G C A A G T C G T A C
Reverse Opposite:
C A T G T C A G A C G T A T G C C G T A A C T G A C T G A G C T A G C T C T G A
p-value:1e-34
log p-value:-8.008e+01
Information Content per bp:1.635
Number of Target Sequences with motif173.0
Percentage of Target Sequences with motif22.27%
Number of Background Sequences with motif3715.3
Percentage of Background Sequences with motif7.89%
Average Position of motif in Targets50.0 +/- 27.0bp
Average Position of motif in Background50.7 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-YAACCTGMCC-
GWAAYHTGABMC
 A C G T G A C T C T G A C T G A T G A C G T A C C G A T A T C G T G C A A G T C G T A C A C G T
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:YAACCTGMCC
NCACCTGTN-
 G A C T C T G A C T G A T G A C G T A C C G A T A T C G T G C A A G T C G T A C
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T

Myb/MA0100.2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:YAACCTGMCC
CCAACTGCCA
 G A C T C T G A C T G A T G A C G T A C C G A T A T C G T G C A A G T C G T A C
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--YAACCTGMCC
RYHYACCTGB--
 A C G T A C G T G A C T C T G A C T G A T G A C G T A C C G A T A T C G T G C A A G T C G T A C
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-YAACCTGMCC
NNCACCTGNN-
 A C G T G A C T C T G A C T G A T G A C G T A C C G A T A T C G T G C A A G T C G T A C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--YAACCTGMCC
CCTCACCTG---
 A C G T A C G T G A C T C T G A C T G A T G A C G T A C C G A T A T C G T G C A A G T C G T A C
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:YAACCTGMCC
--NCGTGACN
 G A C T C T G A C T G A T G A C G T A C C G A T A T C G T G C A A G T C G T A C
A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YAACCTGMCC
ATGCCAGACN
 G A C T C T G A C T G A T G A C G T A C C G A T A T C G T G C A A G T C G T A C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--YAACCTGMCC
SNGCACCTGCHS
 A C G T A C G T G A C T C T G A C T G A T G A C G T A C C G A T A T C G T G C A A G T C G T A C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---YAACCTGMCC---
CGACCAACTGCCATGC
 A C G T A C G T A C G T G A C T C T G A C T G A T G A C G T A C C G A T A T C G T G C A A G T C G T A C A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C