Information for 12-AGATTGTTAT (Motif 26)

C G T A C T A G C G T A A C G T A C G T A C T G A G C T C G A T C G T A A G C T
Reverse Opposite:
T C G A A C G T G C T A C T G A G T A C C G T A G T C A A C G T A G T C C G A T
p-value:1e-10
log p-value:-2.515e+01
Information Content per bp:1.829
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif87.6
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets53.5 +/- 22.8bp
Average Position of motif in Background47.9 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.80
Offset:2
Orientation:forward strand
Alignment:AGATTGTTAT
--ATTGTTA-
 C G T A C T A G C G T A A C G T A C G T A C T G A G C T C G A T C G T A A G C T
A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.75
Offset:2
Orientation:forward strand
Alignment:AGATTGTTAT
--ATTGTT--
 C G T A C T A G C G T A A C G T A C G T A C T G A G C T C G A T C G T A A G C T
A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:AGATTGTTAT-
--ATTGTTTAN
 C G T A C T A G C G T A A C G T A C G T A C T G A G C T C G A T C G T A A G C T A C G T
A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AGATTGTTAT---
AAAATTGTTATGAA
 A C G T C G T A C T A G C G T A A C G T A C G T A C T G A G C T C G A T C G T A A G C T A C G T A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----AGATTGTTAT---
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T C G T A C T A G C G T A A C G T A C G T A C T G A G C T C G A T C G T A A G C T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0172.1_Sox1_2/Jaspar

Match Rank:6
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AGATTGTTAT--
CTATAATTGTTAGCG
 A C G T A C G T A C G T C G T A C T A G C G T A A C G T A C G T A C T G A G C T C G A T C G T A A G C T A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGATTGTTAT----
TAATTGTTCTAAAC
 C G T A C T A G C G T A A C G T A C G T A C T G A G C T C G A T C G T A A G C T A C G T A C G T A C G T A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0063.1_Sox13_1/Jaspar

Match Rank:8
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---AGATTGTTAT---
AANTTATTGTTCTNNA
 A C G T A C G T A C G T C G T A C T A G C G T A A C G T A C G T A C T G A G C T C G A T C G T A A G C T A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0067.1_Sox18_1/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGATTGTTAT----
TTCAATTGTTCTAAAA
 A C G T A C G T C G T A C T A G C G T A A C G T A C G T A C T G A G C T C G A T C G T A A G C T A C G T A C G T A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0119.1_Foxa2_2/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AGATTGTTAT----
NCNTTTGTTATTTNN
 A C G T C G T A C T A G C G T A A C G T A C G T A C T G A G C T C G A T C G T A A G C T A C G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T