Information for 14-GGAASAGABMAGGTCC (Motif 18)

C T A G A T C G G T C A G C T A T A C G T G C A A C T G G T C A A G C T T G C A C G T A A C T G C A T G A C G T A G T C G T A C
Reverse Opposite:
C A T G A C T G G T C A G A T C G T A C A C G T A C G T T C G A A C G T T G A C A C G T A T G C C A G T A C G T A T G C G A T C
p-value:1e-12
log p-value:-2.774e+01
Information Content per bp:1.640
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif59.8
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets43.9 +/- 22.7bp
Average Position of motif in Background51.3 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.61
Offset:10
Orientation:forward strand
Alignment:GGAASAGABMAGGTCC
----------AGGTCA
 C T A G A T C G G T C A G C T A T A C G T G C A A C T G G T C A A G C T T G C A C G T A A C T G C A T G A C G T A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.60
Offset:8
Orientation:forward strand
Alignment:GGAASAGABMAGGTCC
--------TRAGGTCA
 C T A G A T C G G T C A G C T A T A C G T G C A A C T G G T C A A G C T T G C A C G T A A C T G C A T G A C G T A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGAASAGABMAGGTCC-----
----TATTCAAGGTCATGCGA
 C T A G A T C G G T C A G C T A T A C G T G C A A C T G G T C A A G C T T G C A C G T A A C T G C A T G A C G T A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:GGAASAGABMAGGTCC-
-------TCAAGGTCAN
 C T A G A T C G G T C A G C T A T A C G T G C A A C T G G T C A A G C T T G C A C G T A A C T G C A T G A C G T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.60
Offset:7
Orientation:forward strand
Alignment:GGAASAGABMAGGTCC-
-------TCAAGGTCAT
 C T A G A T C G G T C A G C T A T A C G T G C A A C T G G T C A A G C T T G C A C G T A A C T G C A T G A C G T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.60
Offset:9
Orientation:forward strand
Alignment:GGAASAGABMAGGTCC-
---------AAGGTCAC
 C T A G A T C G G T C A G C T A T A C G T G C A A C T G G T C A A G C T T G C A C G T A A C T G C A T G A C G T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PB0200.1_Zfp187_2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGAASAGABMAGGTCC-
-NNAGGGACAAGGGCNC
 C T A G A T C G G T C A G C T A T A C G T G C A A C T G G T C A A G C T T G C A C G T A A C T G C A T G A C G T A G T C G T A C A C G T
A C G T A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GGAASAGABMAGGTCC
------BTCAAGGTCA
 C T A G A T C G G T C A G C T A T A C G T G C A A C T G G T C A A G C T T G C A C G T A A C T G C A T G A C G T A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.57
Offset:8
Orientation:forward strand
Alignment:GGAASAGABMAGGTCC--
--------CAAGGHCANV
 C T A G A T C G G T C A G C T A T A C G T G C A A C T G G T C A A G C T T G C A C G T A A C T G C A T G A C G T A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GGAASAGABMAGGTCC
------ATCAAGGTCA
 C T A G A T C G G T C A G C T A T A C G T G C A A C T G G T C A A G C T T G C A C G T A A C T G C A T G A C G T A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A