Information for 9-STTTRTSTSTCAT (Motif 13)

A T G C A C G T A C G T A C G T C T A G A C G T A T C G C G A T A T G C A C G T A G T C C G T A C G A T
Reverse Opposite:
C G T A A C G T C T A G C G T A A T C G C G T A T A G C C G T A A G T C C G T A C G T A C G T A A T C G
p-value:1e-14
log p-value:-3.308e+01
Information Content per bp:1.870
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.7 +/- 22.8bp
Average Position of motif in Background60.8 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----STTTRTSTSTCAT
ANTCCTTTGTCTNNNN-
 A C G T A C G T A C G T A C G T A T G C A C G T A C G T A C G T C T A G A C G T A T C G C G A T A T G C A C G T A G T C C G T A C G A T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T

JUND/MA0491.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:STTTRTSTSTCAT-
---GGTGACTCATC
 A T G C A C G T A C G T A C G T C T A G A C G T A T C G C G A T A T G C A C G T A G T C C G T A C G A T A C G T
A C G T A C G T A C G T C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C

PB0142.1_Jundm2_2/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:STTTRTSTSTCAT----
-NNGGTGACTCATCANN
 A T G C A C G T A C G T A C G T C T A G A C G T A T C G C G A T A T G C A C G T A G T C C G T A C G A T A C G T A C G T A C G T A C G T
A C G T C A G T G A C T C A T G T C A G A G C T A C T G C G T A A T G C C A G T T G A C C T G A A G C T G A T C T G C A G T C A A C G T

FOS/MA0476.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:STTTRTSTSTCAT-
---TGTGACTCATT
 A T G C A C G T A C G T A C G T C T A G A C G T A T C G C G A T A T G C A C G T A G T C C G T A C G A T A C G T
A C G T A C G T A C G T C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T

JDP2/MA0655.1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:STTTRTSTSTCAT
----ATGAGTCAT
 A T G C A C G T A C G T A C G T C T A G A C G T A T C G C G A T A T G C A C G T A G T C C G T A C G A T
A C G T A C G T A C G T A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T

PB0108.1_Atf1_2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:STTTRTSTSTCAT--
-NTTATTCGTCATNC
 A T G C A C G T A C G T A C G T C T A G A C G T A T C G C G A T A T G C A C G T A G T C C G T A C G A T A C G T A C G T
A C G T C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-STTTRTSTSTCAT
CCTTTGTTTT----
 A C G T A T G C A C G T A C G T A C G T C T A G A C G T A T C G C G A T A T G C A C G T A G T C C G T A C G A T
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:STTTRTSTSTCAT-
--------GTCATN
 A T G C A C G T A C G T A C G T C T A G A C G T A T C G C G A T A T G C A C G T A G T C C G T A C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G

BATF::JUN/MA0462.1/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:STTTRTSTSTCAT---
-----TGAGTCATTTC
 A T G C A C G T A C G T A C G T C T A G A C G T A T C G C G A T A T G C A C G T A G T C C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:STTTRTSTSTCAT
---DATGASTCAT
 A T G C A C G T A C G T A C G T C T A G A C G T A T C G C G A T A T G C A C G T A G T C C G T A C G A T
A C G T A C G T A C G T C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T