Information for 3-RMARRCAVGCRCAKGS (Motif 5)

C T A G G T C A C G T A T C G A T C A G T A G C C T G A T A C G T C A G G T A C C T G A A G T C G T C A A C T G A C T G A T C G
Reverse Opposite:
T A G C G T A C T G A C C A G T C T A G A G C T A C T G A G T C A T G C A G C T A T C G A G T C A G C T C G A T C A G T G A T C
p-value:1e-13
log p-value:-3.093e+01
Information Content per bp:1.622
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif184.7
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets49.5 +/- 28.1bp
Average Position of motif in Background51.1 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:RMARRCAVGCRCAKGS
----CCAGGAACAG--
 C T A G G T C A C G T A T C G A T C A G T A G C C T G A T A C G T C A G G T A C C T G A A G T C G T C A A C T G A C T G A T C G
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:RMARRCAVGCRCAKGS
------AAGCACATGG
 C T A G G T C A C G T A T C G A T C A G T A G C C T G A T A C G T C A G G T A C C T G A A G T C G T C A A C T G A C T G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-RMARRCAVGCRCAKGS---
NGCATGTCNNGACATGCNNN
 A C G T C T A G G T C A C G T A T C G A T C A G T A G C C T G A T A C G T C A G G T A C C T G A A G T C G T C A A C T G A C T G A T C G A C G T A C G T A C G T
C T A G C T A G A G T C G T C A C G A T A C T G G A C T G A T C A G T C C T A G C T A G C T G A A G T C G C T A C A G T T C A G G A T C G A T C A G C T C A G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:RMARRCAVGCRCAKGS
-----CACGCA-----
 C T A G G T C A C G T A T C G A T C A G T A G C C T G A T A C G T C A G G T A C C T G A A G T C G T C A A C T G A C T G A T C G
A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:RMARRCAVGCRCAKGS-
--AAGGKGRCGCAGGCA
 C T A G G T C A C G T A T C G A T C A G T A G C C T G A T A C G T C A G G T A C C T G A A G T C G T C A A C T G A C T G A T C G A C G T
A C G T A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

NRF1/MA0506.1/Jaspar

Match Rank:6
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:RMARRCAVGCRCAKGS--
-------TGCGCAGGCGC
 C T A G G T C A C G T A T C G A T C A G T A G C C T G A T A C G T C A G G T A C C T G A A G T C G T C A A C T G A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

Foxo1/MA0480.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-RMARRCAVGCRCAKGS
TGTAAACAGGA------
 A C G T C T A G G T C A C G T A T C G A T C A G T A G C C T G A T A C G T C A G G T A C C T G A A G T C G T C A A C T G A C T G A T C G
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---RMARRCAVGCRCAKGS-
NRRRCAWGTCCDGRCATGYY
 A C G T A C G T A C G T C T A G G T C A C G T A T C G A T C A G T A G C C T G A T A C G T C A G G T A C C T G A A G T C G T C A A C T G A C T G A T C G A C G T
C G T A C T G A C T A G C T G A A G T C G C T A C G A T A T C G G A C T G A T C A G T C C T G A C T A G C T A G A G T C G C T A C G A T C T A G G A T C G A T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:RMARRCAVGCRCAKGS
--TBGCACGCAA----
 C T A G G T C A C G T A T C G A T C A G T A G C C T G A T A C G T C A G G T A C C T G A A G T C G T C A A C T G A C T G A T C G
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:RMARRCAVGCRCAKGS
GTAAACA---------
 C T A G G T C A C G T A T C G A T C A G T A G C C T G A T A C G T C A G G T A C C T G A A G T C G T C A A C T G A C T G A T C G
C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T