Information for 9-WAAGACTTTS (Motif 28)

C G T A C G T A C G T A A C T G G T C A A G T C A C G T A C G T A C G T T A C G
Reverse Opposite:
A T G C G T C A C G T A C G T A A C T G C A G T G T A C A C G T A C G T G C A T
p-value:1e-5
log p-value:-1.331e+01
Information Content per bp:1.870
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif3.29%
Number of Background Sequences with motif349.6
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets45.9 +/- 28.5bp
Average Position of motif in Background50.1 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0136.1_IRC900814_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---WAAGACTTTS---
TTTTACGACTTTCCAT
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G G T C A A G T C A C G T A C G T A C G T T A C G A C G T A C G T A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---WAAGACTTTS---
NNATTGGACTTTNGNN
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G G T C A A G T C A C G T A C G T A C G T T A C G A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

ESRRB/MA0141.3/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:WAAGACTTTS-
NATGACCTTGA
 C G T A C G T A C G T A A C T G G T C A A G T C A C G T A C G T A C G T T A C G A C G T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:WAAGACTTTS
-TTGACTTTT
 C G T A C G T A C G T A A C T G G T C A A G T C A C G T A C G T A C G T T A C G
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---WAAGACTTTS----
NNNNATGACCTTGANTN
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G G T C A A G T C A C G T A C G T A C G T T A C G A C G T A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Esrra/MA0592.2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:WAAGACTTTS--
-ATGACCTTGAA
 C G T A C G T A C G T A A C T G G T C A A G T C A C G T A C G T A C G T T A C G A C G T A C G T
A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:WAAGACTTTS-
-ATGACCTTGA
 C G T A C G T A C G T A A C T G G T C A A G T C A C G T A C G T A C G T T A C G A C G T
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:WAAGACTTTS------
----ACTTTCACTTTC
 C G T A C G T A C G T A A C T G G T C A A G T C A C G T A C G T A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

HNF4G/MA0484.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:WAAGACTTTS------
-TGGACTTTGNNCTCN
 C G T A C G T A C G T A A C T G G T C A A G T C A C G T A C G T A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PH0066.1_Hoxc11/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------WAAGACTTTS
NNNTTTTACGACNTTN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G G T C A A G T C A C G T A C G T A C G T T A C G
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A