Information for 17-CAACAGGAGAGATCAC (Motif 25)

A G T C C G T A C T G A A G T C T C G A T A C G A C T G C T G A A T C G C T G A A T C G C T G A A C G T T A G C G T C A A G T C
Reverse Opposite:
T C A G C A G T A C T G C G T A A G C T A T G C A G C T A T G C A G C T A G T C A G T C A G C T T A C G A G C T C G A T A C T G
p-value:1e-7
log p-value:-1.635e+01
Information Content per bp:1.714
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.7 +/- 25.2bp
Average Position of motif in Background68.1 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CAACAGGAGAGATCAC
CCACACAGCAGGAGA------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T G A A G T C T C G A T A C G A C T G C T G A A T C G C T G A A T C G C T G A A C G T T A G C G T C A A G T C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CAACAGGAGAGATCAC
CCACACAGCAGGAGA------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T G A A G T C T C G A T A C G A C T G C T G A A T C G C T G A A T C G C T G A A C G T T A G C G T C A A G T C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.54
Offset:9
Orientation:forward strand
Alignment:CAACAGGAGAGATCAC-
---------AGATAASR
 A G T C C G T A C T G A A G T C T C G A T A C G A C T G C T G A A T C G C T G A A T C G C T G A A C G T T A G C G T C A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAACAGGAGAGATCAC
CACAGCAGGGGG------
 A C G T A C G T A G T C C G T A C T G A A G T C T C G A T A C G A C T G C T G A A T C G C T G A A T C G C T G A A C G T T A G C G T C A A G T C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CAACAGGAGAGATCAC
GAGCACAGCAGGACA------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T G A A G T C T C G A T A C G A C T G C T G A A T C G C T G A A T C G C T G A A C G T T A G C G T C A A G T C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CAACAGGAGAGATCAC
-------AGRGGTCA-
 A G T C C G T A C T G A A G T C T C G A T A C G A C T G C T G A A T C G C T G A A T C G C T G A A C G T T A G C G T C A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CAACAGGAGAGATCAC
DCHCAGCAGGRGGCC----
 A C G T A C G T A C G T A G T C C G T A C T G A A G T C T C G A T A C G A C T G C T G A A T C G C T G A A T C G C T G A A C G T T A G C G T C A A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CAACAGGAGAGATCAC-
------NNGAGATAAGA
 A G T C C G T A C T G A A G T C T C G A T A C G A C T G C T G A A T C G C T G A A T C G C T G A A C G T T A G C G T C A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.52
Offset:8
Orientation:forward strand
Alignment:CAACAGGAGAGATCAC
--------AAGGTCAC
 A G T C C G T A C T G A A G T C T C G A T A C G A C T G C T G A A T C G C T G A A T C G C T G A A C G T T A G C G T C A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PB0126.1_Gata5_2/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CAACAGGAGAGATCAC---
--GACAGAGATATCAGTGT
 A G T C C G T A C T G A A G T C T C G A T A C G A C T G C T G A A T C G C T G A A T C G C T G A A C G T T A G C G T C A A G T C A C G T A C G T A C G T
A C G T A C G T T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T