Information for 6-ACCTTGCCAA (Motif 24)

C G T A A G T C A G T C A C G T A C G T A T C G A G T C A G T C G T C A C G T A
Reverse Opposite:
C G A T A C G T A C T G A C T G A T G C C G T A C G T A A C T G A C T G A C G T
p-value:1e-8
log p-value:-1.846e+01
Information Content per bp:1.927
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif42.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets56.9 +/- 22.5bp
Average Position of motif in Background44.7 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:ACCTTGCCAA--
--GGTGCCAAGT
 C G T A A G T C A G T C A C G T A C G T A T C G A G T C A G T C G T C A C G T A A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:ACCTTGCCAA-
---TTGCCAAG
 C G T A A G T C A G T C A C G T A C G T A T C G A G T C A G T C G T C A C G T A A C G T
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:ACCTTGCCAA-
--CGTGCCAAG
 C G T A A G T C A G T C A C G T A C G T A T C G A G T C A G T C G T C A C G T A A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:ACCTTGCCAA
----TGCCAA
 C G T A A G T C A G T C A C G T A C G T A T C G A G T C A G T C G T C A C G T A
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------ACCTTGCCAA
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A T C G A G T C A G T C G T C A C G T A
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ACCTTGCCAA
BNTGDCCTTG----
 A C G T A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A T C G A G T C A G T C G T C A C G T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ACCTTGCCAA
ATGACCTTGA---
 A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A T C G A G T C A G T C G T C A C G T A
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACCTTGCCAA
TGACCTTGAV--
 A C G T A C G T C G T A A G T C A G T C A C G T A C G T A T C G A G T C A G T C G T C A C G T A
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ACCTTGCCAA
NTGACCTTGA---
 A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A T C G A G T C A G T C G T C A C G T A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ACCTTGCCAA--
---ATGCCAACC
 C G T A A G T C A G T C A C G T A C G T A T C G A G T C A G T C G T C A C G T A A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C