Information for 14-AGCATTTTTTTTTTCA (Motif 19)

G T C A A T C G A T G C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T G T A C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A A C G T A T C G A T G C A C G T
p-value:1e-9
log p-value:-2.188e+01
Information Content per bp:1.884
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.8 +/- 30.4bp
Average Position of motif in Background37.4 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0116.1_Elf3_2/Jaspar

Match Rank:1
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:AGCATTTTTTTTTTCA--
-GNATTTTTTTTTTGANC
 G T C A A T C G A T G C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T G T A C C G T A A C G T A C G T
A C G T C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:AGCATTTTTTTTTTCA--
-NNNNTTTTTTTTTNAAC
 G T C A A T C G A T G C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T G T A C C G T A A C G T A C G T
A C G T C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:AGCATTTTTTTTTTCA----
------TTTTTTTTCNNGTN
 G T C A A T C G A T G C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGCATTTTTTTTTTCA
--GAATGTTTGTTT--
 G T C A A T C G A T G C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T G T A C C G T A
A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGCATTTTTTTTTTCA-
--NTNTTGTTGTTTGTN
 G T C A A T C G A T G C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T G T A C C G T A A C G T
A C G T A C G T G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PB0186.1_Tcf3_2/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AGCATTTTTTTTTTCA---
----NNTTTNTTTTNGNNN
 G T C A A T C G A T G C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T A G C T C G A T A C G T C G A T C G A T C G A T A G C T G C A T T A G C A T C G T A C G A T G C G A C T

PB0146.1_Mafk_2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGCATTTTTTTTTTCA
CCTTGCAATTTTTNN----
 A C G T A C G T A C G T G T C A A T C G A T G C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T G T A C C G T A
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGCATTTTTTTTTTCA--
----NNTTTTTCTTATNT
 G T C A A T C G A T G C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AGCATTTTTTTTTTCA----
-----ANATTTTTGCAANTN
 G T C A A T C G A T G C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGCATTTTTTTTTTCA---
---NNANTTTTATTGGNNN
 G T C A A T C G A T G C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G