Information for 13-GDTCAGHGCCAGTGHT (Motif 18)

C T A G C G T A A C G T A G T C C G T A A C T G G A T C A T C G A G T C A G T C C G T A A C T G C G A T A C T G G C T A C G A T
Reverse Opposite:
G C T A C A G T A G T C C G T A T G A C C G A T A C T G T C A G T A G C C A T G A G T C A C G T A C T G T G C A G A C T A G T C
p-value:1e-9
log p-value:-2.188e+01
Information Content per bp:1.744
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 28.1bp
Average Position of motif in Background24.6 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GDTCAGHGCCAGTGHT
AGGTCAAGGTCA-----
 A C G T C T A G C G T A A C G T A G T C C G T A A C T G G A T C A T C G A G T C A G T C C G T A A C T G C G A T A C T G G C T A C G A T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GDTCAGHGCCAGTGHT
RGTTAGTGCCCY----
 C T A G C G T A A C G T A G T C C G T A A C T G G A T C A T C G A G T C A G T C C G T A A C T G C G A T A C T G G C T A C G A T
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GDTCAGHGCCAGTGHT
NNNANTGCAGTGCNNTT---
 A C G T A C G T A C G T A C G T C T A G C G T A A C G T A G T C C G T A A C T G G A T C A T C G A G T C A G T C C G T A A C T G C G A T A C T G G C T A C G A T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GDTCAGHGCCAGTGHT
AGGTCAAGGTCA-----
 A C G T C T A G C G T A A C G T A G T C C G T A A C T G G A T C A T C G A G T C A G T C C G T A A C T G C G A T A C T G G C T A C G A T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GDTCAGHGCCAGTGHT
AAGTTCAAGGTCAGC---
 A C G T A C G T C T A G C G T A A C G T A G T C C G T A A C T G G A T C A T C G A G T C A G T C C G T A A C T G C G A T A C T G G C T A C G A T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GDTCAGHGCCAGTGHT
--TCAGTCTT------
 C T A G C G T A A C G T A G T C C G T A A C T G G A T C A T C G A G T C A G T C C G T A A C T G C G A T A C T G G C T A C G A T
A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------GDTCAGHGCCAGTGHT
GAGCCTGGTACTGWGCCTGR---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A G T C C G T A A C T G G A T C A T C G A G T C A G T C C G T A A C T G C G A T A C T G G C T A C G A T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GDTCAGHGCCAGTGHT
AGGTCANTGACCTN---
 A C G T C T A G C G T A A C G T A G T C C G T A A C T G G A T C A T C G A G T C A G T C C G T A A C T G C G A T A C T G G C T A C G A T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GDTCAGHGCCAGTGHT--
--NNNNTGCCAGTGATTG
 C T A G C G T A A C G T A G T C C G T A A C T G G A T C A T C G A G T C A G T C C G T A A C T G C G A T A C T G G C T A C G A T A C G T A C G T
A C G T A C G T G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

SOX21/MA0866.1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GDTCAGHGCCAGTGHT
-AACAATGGTAGTGTT
 C T A G C G T A A C G T A G T C C G T A A C T G G A T C A T C G A G T C A G T C C G T A A C T G C G A T A C T G G C T A C G A T
A C G T C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T