Information for 2-TACTRAGCWCARR (Motif 6)

A C G T C T G A A G T C A C G T C T A G C G T A A C T G A G T C C G A T A T G C C G T A C T G A C T A G
Reverse Opposite:
A G T C A G C T A C G T A T C G C G T A A C T G A G T C A C G T A G T C C G T A A C T G A G C T C G T A
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.2 +/- 21.7bp
Average Position of motif in Background57.4 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TACTRAGCWCARR
NTAATGAGCT----
 A C G T A C G T C T G A A G T C A C G T C T A G C G T A A C T G A G T C C G A T A T G C C G T A C T G A C T A G
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T A C G T A C G T

PH0045.1_Hoxa1/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TACTRAGCWCARR
ACGGTAATTAGCTCAG-
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T C T A G C G T A A C T G A G T C C G A T A T G C C G T A C T G A C T A G
T C G A T G A C C T A G A C T G A G C T G T C A C G T A A C G T A C G T C T G A T A C G A G T C G A C T G A T C C T G A C T A G A C G T

PH0081.1_Pdx1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TACTRAGCWCARR
AAGGTAATTAGCTCAT-
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T C T A G C G T A A C T G A G T C C G A T A T G C C G T A C T G A C T A G
T G C A T G C A C T A G A T C G G A C T T G C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T T A G C C G T A C A G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TACTRAGCWCARR
GACGATAATGAGCTTGC-
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T C T A G C G T A A C T G A G T C C G A T A T G C C G T A C T G A C T A G
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C A C G T

PH0049.1_Hoxa2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TACTRAGCWCARR
AAGGTAATTAGCTCAT-
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T C T A G C G T A A C T G A G T C C G A T A T G C C G T A C T G A C T A G
C T G A T G C A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A T A C G G A T C G A C T G T A C C G T A C G A T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TACTRAGCWCARR
---TRAGGTCA--
 A C G T C T G A A G T C A C G T C T A G C G T A A C T G A G T C C G A T A T G C C G T A C T G A C T A G
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

Hoxb5/MA0904.1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TACTRAGCWCARR
ACGGTAATTAGCTCAT-
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T C T A G C G T A A C T G A G T C C G A T A T G C C G T A C T G A C T A G
T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T A C G T

PH0060.1_Hoxb5/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TACTRAGCWCARR
ACGGTAATTAGCTCAT-
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T C T A G C G T A A C T G A G T C C G A T A T G C C G T A C T G A C T A G
T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TACTRAGCWCARR
--NAAACCACAG-
 A C G T C T G A A G T C A C G T C T A G C G T A A C T G A G T C C G A T A T G C C G T A C T G A C T A G
A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TACTRAGCWCARR
--CAAAGGTCAG-
 A C G T C T G A A G T C A C G T C T A G C G T A A C T G A G T C C G A T A T G C C G T A C T G A C T A G
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T