Information for 3-CCACWAGGTGGCGCAM (Motif 4)

G T A C G T A C C G T A A G T C G C T A G T C A C T A G T C A G C A G T A C T G C A T G G A T C T C A G A G T C C G T A G T A C
Reverse Opposite:
A C T G C G A T C T A G A G T C C T A G G T A C G T A C G C T A A G T C A G T C C A G T C G A T C T A G A C G T A C T G C A T G
p-value:1e-21
log p-value:-5.016e+01
Information Content per bp:1.737
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.8 +/- 26.7bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---CCACWAGGTGGCGCAM
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T G T A C G T A C C G T A A G T C G C T A G T C A C T A G T C A G C A G T A C T G C A T G G A T C T C A G A G T C C G T A G T A C
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---CCACWAGGTGGCGCAM-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T G T A C G T A C C G T A A G T C G C T A G T C A C T A G T C A G C A G T A C T G C A T G G A T C T C A G A G T C C G T A G T A C A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CCACWAGGTGGCGCAM---
GCCASCAGGGGGCGCYVNNG
 A C G T G T A C G T A C C G T A A G T C G C T A G T C A C T A G T C A G C A G T A C T G C A T G G A T C T C A G A G T C C G T A G T A C A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCACWAGGTGGCGCAM
ATCCAC------------
 A C G T A C G T G T A C G T A C C G T A A G T C G C T A G T C A C T A G T C A G C A G T A C T G C A T G G A T C T C A G A G T C C G T A G T A C
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCACWAGGTGGCGCAM---
----AAGGKGRCGCAGGCA
 G T A C G T A C C G T A A G T C G C T A G T C A C T A G T C A G C A G T A C T G C A T G G A T C T C A G A G T C C G T A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

SCRT2/MA0744.1/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCACWAGGTGGCGCAM
ATGCAACAGGTGG-----
 A C G T A C G T G T A C G T A C C G T A A G T C G C T A G T C A C T A G T C A G C A G T A C T G C A T G G A T C T C A G A G T C C G T A G T A C
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCACWAGGTGGCGCAM
--AACAGGTGNT----
 G T A C G T A C C G T A A G T C G C T A G T C A C T A G T C A G C A G T A C T G C A T G G A T C T C A G A G T C C G T A G T A C
A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CCACWAGGTGGCGCAM
------NATGTTGCAA
 G T A C G T A C C G T A A G T C G C T A G T C A C T A G T C A G C A G T A C T G C A T G G A T C T C A G A G T C C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

SCRT1/MA0743.1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CCACWAGGTGGCGCAM
GAGCAACAGGTGGTT---
 A C G T A C G T G T A C G T A C C G T A A G T C G C T A G T C A C T A G T C A G C A G T A C T G C A T G G A T C T C A G A G T C C G T A G T A C
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CCACWAGGTGGCGCAM-
-GCGGAGGTGTCGCCTC
 G T A C G T A C C G T A A G T C G C T A G T C A C T A G T C A G C A G T A C T G C A T G G A T C T C A G A G T C C G T A G T A C A C G T
A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C