Information for 7-TTGTAYCAYCTAA (Motif 12)

A C G T A C G T A C T G A C G T C G T A A G T C A G T C C G T A A G T C A G T C A C G T T C G A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C T G T C A G C G A T A C T G C T A G A C G T C G T A A G T C C G T A C G T A
p-value:1e-11
log p-value:-2.733e+01
Information Content per bp:1.914
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.2 +/- 20.7bp
Average Position of motif in Background38.4 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTGTAYCAYCTAA
AATGTATCAAT---
 A C G T A C G T A C G T A C T G A C G T C G T A A G T C A G T C C G T A A G T C A G T C A C G T T C G A C G T A
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTGTAYCAYCTAA
TTGCAACATN---
 A C G T A C G T A C T G A C G T C G T A A G T C A G T C C G T A A G T C A G T C A C G T T C G A C G T A
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTGTAYCAYCTAA
ATTGCATCAK----
 A C G T A C G T A C G T A C T G A C G T C G T A A G T C A G T C C G T A A G T C A G T C A C G T T C G A C G T A
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTGTAYCAYCTAA
ATTGCATCAT----
 A C G T A C G T A C G T A C T G A C G T C G T A A G T C A G T C C G T A A G T C A G T C A C G T T C G A C G T A
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTGTAYCAYCTAA
---TGACACCT--
 A C G T A C G T A C T G A C G T C G T A A G T C A G T C C G T A A G T C A G T C A C G T T C G A C G T A
A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T

ATF4/MA0833.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTGTAYCAYCTAA
TATTGCATCATCC--
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A G T C C G T A A G T C A G T C A C G T T C G A C G T A
A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TTGTAYCAYCTAA
ADGGYAGYAGCATCT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A G T C C G T A A G T C A G T C A C G T T C G A C G T A
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTGTAYCAYCTAA
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A G T C C G T A A G T C A G T C A C G T T C G A C G T A
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTGTAYCAYCTAA
-KTTCACACCT--
 A C G T A C G T A C T G A C G T C G T A A G T C A G T C C G T A A G T C A G T C A C G T T C G A C G T A
A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TTGTAYCAYCTAA
NAATTTTATTACCTNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A G T C C G T A A G T C A G T C A C G T T C G A C G T A
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A