Information for 6-WGGGAAATCCCDT (Motif 11)

C G T A C T A G A T C G C T A G C T G A C G T A C G T A A C G T A T G C A T G C G A T C C G T A C A G T
Reverse Opposite:
G T C A G A C T C T A G A T C G T A C G T G C A G C A T G C A T G A C T G A T C A T G C A G T C G C A T
p-value:1e-12
log p-value:-2.798e+01
Information Content per bp:1.615
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.58%
Number of Background Sequences with motif497.1
Percentage of Background Sequences with motif1.03%
Average Position of motif in Targets52.3 +/- 26.6bp
Average Position of motif in Background53.1 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:WGGGAAATCCCDT
-GGGAAATCCCCN
 C G T A C T A G A T C G C T A G C T G A C G T A C G T A A C G T A T G C A T G C G A T C C G T A C A G T
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:WGGGAAATCCCDT
-GGAAATCCCC--
 C G T A C T A G A T C G C T A G C T G A C G T A C G T A A C G T A T G C A T G C G A T C C G T A C A G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:WGGGAAATCCCDT
-GGAAATTCCC--
 C G T A C T A G A T C G C T A G C T G A C G T A C G T A A C G T A T G C A T G C G A T C C G T A C A G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.79
Offset:1
Orientation:forward strand
Alignment:WGGGAAATCCCDT
-GGAAATTCCC--
 C G T A C T A G A T C G C T A G C T G A C G T A C G T A A C G T A T G C A T G C G A T C C G T A C A G T
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:WGGGAAATCCCDT
--GGAAANCCCC-
 C G T A C T A G A T C G C T A G C T G A C G T A C G T A A C G T A T G C A T G C G A T C C G T A C A G T
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:WGGGAAATCCCDT
AGGGGAATCCCCT
 C G T A C T A G A T C G C T A G C T G A C G T A C G T A A C G T A T G C A T G C G A T C C G T A C A G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-WGGGAAATCCCDT
GGGGGAATCCCC--
 A C G T C G T A C T A G A T C G C T A G C T G A C G T A C G T A A C G T A T G C A T G C G A T C C G T A C A G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:WGGGAAATCCCDT
AGGGGATTCCCCT
 C G T A C T A G A T C G C T A G C T G A C G T A C G T A A C G T A T G C A T G C G A T C C G T A C A G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--WGGGAAATCCCDT
NATGGAAAAN-----
 A C G T A C G T C G T A C T A G A T C G C T A G C T G A C G T A C G T A A C G T A T G C A T G C G A T C C G T A C A G T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:WGGGAAATCCCDT
TGGAAAA------
 C G T A C T A G A T C G C T A G C T G A C G T A C G T A A C G T A T G C A T G C G A T C C G T A C A G T
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T