Information for 5-AAGGGTGATAGCA (Motif 10)

T G C A C G T A C T A G C T A G A T C G A C G T A T C G C G T A C G A T C T G A T A C G A G T C C G T A
Reverse Opposite:
C G A T C T A G A T G C A G C T C G T A C G A T A T G C C G T A A T G C G A T C A G T C C G A T A C G T
p-value:1e-13
log p-value:-3.098e+01
Information Content per bp:1.734
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif45.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets39.0 +/- 27.5bp
Average Position of motif in Background51.9 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAGGGTGATAGCA
NNNANTGA-----
 T G C A C G T A C T A G C T A G A T C G A C G T A T C G C G T A C G A T C T G A T A C G A G T C C G T A
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAGGGTGATAGCA----
AATNTTGATACCCTATN
 T G C A C G T A C T A G C T A G A T C G A C G T A T C G C G T A C G A T C T G A T A C G A G T C C G T A A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAGGGTGATAGCA
-AAGGTGTKAA--
 T G C A C G T A C T A G C T A G A T C G A C G T A T C G C G T A C G A T C T G A T A C G A G T C C G T A
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T

PH0161.1_Six1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAGGGTGATAGCA----
ANNNATGATACCCCATC
 T G C A C G T A C T A G C T A G A T C G A C G T A T C G C G T A C G A T C T G A T A C G A G T C C G T A A C G T A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAGGGTGATAGCA
--AGGTGTCA---
 T G C A C G T A C T A G C T A G A T C G A C G T A T C G C G T A C G A T C T G A T A C G A G T C C G T A
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T

PH0162.1_Six2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAGGGTGATAGCA----
ANANGTGATACCCCATT
 T G C A C G T A C T A G C T A G A T C G A C G T A T C G C G T A C G A T C T G A T A C G A G T C C G T A A C G T A C G T A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

Six3/MA0631.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAGGGTGATAGCA----
ANANGTGATACCCTATN
 T G C A C G T A C T A G C T A G A T C G A C G T A T C G C G T A C G A T C T G A T A C G A G T C C G T A A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAGGGTGATAGCA----
ANANGTGATACCCTATN
 T G C A C G T A C T A G C T A G A T C G A C G T A T C G C G T A C G A T C T G A T A C G A G T C C G T A A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

GLI2/MA0734.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAGGGTGATAGCA
CAGTGTGGTCGC-
 T G C A C G T A C T A G C T A G A T C G A C G T A T C G C G T A C G A T C T G A T A C G A G T C C G T A
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAGGGTGATAGCA----
ANANNTGATACCCNATN
 T G C A C G T A C T A G C T A G A T C G A C G T A T C G C G T A C G A T C T G A T A C G A G T C C G T A A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T